Gene Svir_04780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04780 
Symbol 
ID8385816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp471028 
End bp471810 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID644974576 
Producthypothetical protein 
Protein accessionYP_003132380 
Protein GI257054548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGATCG TGGGCGTGGT GCTGCTCATC GTCGCGGTGG TCGCCTTCTT CTACATGAAG 
CACACGCGTA GCGAACTGCA CGCCATGATC GGCACGGAGA CGCTGTCGAT CCCACAGCTG
GAGCAGTATC GGCAGGCGTC CGACGAGGTG GGCGGTAGGG GAGCTTTCCG GAAGACCGCG
GAGGTCGTGG GCGCCGCACA CCCCGGTCCG CACGGCCCGT TGAAGGCGGA ACTGTCCAAG
ACCGAATGCG TGTGGTACCG CTACCGCATC GATCGGCACT ACGAGGTCAT CGAGTACCGG
GACGGCAAGC GTCACCGCCG CAAGCGCACC GAGCGGGTCG CCGAGCACAC CTCCGCCCAG
AACTACGCGG TGATAGATGA GGAAGGCCGC ACCATCGGCG TCGACCCGAA CGGCACCAAA
CCCGACTCTG TCGAGCAGAC GGTGAGCCGG TTCGAACCTC ACCGCGGCAA CTCTCAGAGC
ATCGAGCTGT TCGGCTTCAA GCTGCCCACG ATGTTGGGAC GTGGTGACAG CACGATCGGA
TACGACTACA AGGAGTGGGT CATCCGACCG GGCCAACGTC TCTACATCCT CGGCGAGGTA
CACGACCGGT TCGGCCCGCT CATGATCGGT AAACCCGCCC AGGGCGGTCA CTTCATCATC
TCCACGCGCA CTGAGGAGGA ACTGCGGGCG AGCCGGGTGA AGCGGCACAA ACTGCTGGCG
ATCACCGTGA TCACCAGCTT CGTGCTCGGA TGGGTGTTGC TCATCGCCGA TCTGCTCCGC
TGA
 
Protein sequence
MWIVGVVLLI VAVVAFFYMK HTRSELHAMI GTETLSIPQL EQYRQASDEV GGRGAFRKTA 
EVVGAAHPGP HGPLKAELSK TECVWYRYRI DRHYEVIEYR DGKRHRRKRT ERVAEHTSAQ
NYAVIDEEGR TIGVDPNGTK PDSVEQTVSR FEPHRGNSQS IELFGFKLPT MLGRGDSTIG
YDYKEWVIRP GQRLYILGEV HDRFGPLMIG KPAQGGHFII STRTEEELRA SRVKRHKLLA
ITVITSFVLG WVLLIADLLR