| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04760 |
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| Symbol | |
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| ID | 8385814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 467652 |
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| End bp | 469340 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974574 |
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| Product | choline dehydrogenase-like flavoprotein |
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| Protein accession | YP_003132378 |
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| Protein GI | 257054546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.633158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTACG ACGTCGTAGT CGTCGGTTCG GGCTTCGGCG GTAGCGTCGC CGCTCTGCGA
TTGACGGAGA AGGGCTACCG CGTCGCGGTC ATCGAGGCCG GTCGCCGGTT CGCGGACGAC
GAGTTCGCCA AAACCTCCTG GGATCTACGC CGTTACCTGT GGGCACCCCG CCTCGGCTGT
TTCGGCATCC AGCGCGTTCA CCTGCTCAAG GACGTCATGG TGTTGGCGGG GGCGGGTGTC
GGCGGGGGTT CGCTCGTCTA CGCCAACACG CTGTACCGAC CGCTGAAGCC GTTCTACACG
GACCGGCAGT GGGCGCACAT CACCGACTGG GAGGCCGAGC TGGCCCCGTA CTACGACCAG
GCATCCCGCA TGCTCGGTGT GGTCACCAAC CCCACGGTGA CACCGTCGGA CGAGGTGATG
CGCAAGGTCG CCGCCGACAT GGGGGTCGAG GACACCTACC ACCCGACACC GGTCGGCGTG
TACTTCGGTG AGCCCGGTCG CACGGTGTCG GACCCGTACT TCGGCGGTAT CGGACCGGAG
CGGACAGGAT GCACCGAATG CGGCGCCTGT ATGACCGGAT GCCGCGTCGG CGCCAAGAAC
ACGTTGGTGA AGAACTACCT GTATCTCGCG GAACGCAACG GCGCCAAGGT CATCCCGTTG
ACCACGGTGA CGGCCGTGCG CCCTCGCGGC GACGGCACGT TCGAAGTGGA CATCCGCAAG
ACCGGCACGT CCTCGCGCCG GTTCCGGCAC ACGCTCACCG CCGGCCACGT GGTGCTGGCC
GCGGGCACGT GGGGCACGCA GCGGCTGCTG CACGACATGC GCGACAAGGG TGTGCTGCCC
CGGCTGTCCG CACGACTCGG TGAACTGACG CGCACGAACT CCGAGGCCAT CGTCGGTGCG
GGGCGGCCCA CCGTCGACCC GGAGAACGAC TACAGCCGCG GGGTGGCCAT CACGTCGTCG
ATCCACCCCG ACGAGAACAC CCACATCGAA CCCGTGCGCT ACGGCAAGGG CAGCAACGCG
ATGAGTCTGT TGCAGACCAT CGCCACCGAC GGCTCGTCGC CGGTGCCGCG TTGGAAACAG
GCGTTGCGGT TCGTGTGCAA ACACCCGATC CAGACGCTCA GGCTGTTGAA CGGTTACCGG
TGGAGTGAAC GCACGGTGAT CCTGCTGGTG ATGCAGAGTC TGGACAACTC CATCACCACC
TACACCAAGC GAGGCTGGTT CGGACGTCGC AAGTACACGT CGAAACAGGG GCACGGAAAG
CCCAATCCGA CCTTCATCCC CGCGGGGCAC AAGGCGAATC AGCTCACGGC CAAACACATC
GACGGGGTCG CGGGTGGTAC CTGGGGTGAG ATCTTCAACA TCCCGTTGAC GGCGCATTTC
ATCGGTGGCG CACCCATCGG AACCGACCCC GACAACGGCG TCATCGATCC GTACCACCGG
GTGTTCAACT ACCCGAACCT GCACGTCGTG GACGGTGCCG CCATCACGGC CAACCTCGGG
GTGAACCCGT CGCTGACCAT CGCCGCTCAG GCCGAGCGCG CGTTCTCGTT CTGGCCGAAC
AAGGGTGAGG CCGATCCGCG CCCCGATCAG CGTGAGGGGT ACAAGCGGAT CGCGCCCGTC
GCTCCGAAGA ATCCGGTGGT GCCCGCGGAC GCGCCGGGAG CGCTGCGGTT GCCGATCACT
CCCAAGTGA
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| Protein sequence | MDYDVVVVGS GFGGSVAALR LTEKGYRVAV IEAGRRFADD EFAKTSWDLR RYLWAPRLGC
FGIQRVHLLK DVMVLAGAGV GGGSLVYANT LYRPLKPFYT DRQWAHITDW EAELAPYYDQ
ASRMLGVVTN PTVTPSDEVM RKVAADMGVE DTYHPTPVGV YFGEPGRTVS DPYFGGIGPE
RTGCTECGAC MTGCRVGAKN TLVKNYLYLA ERNGAKVIPL TTVTAVRPRG DGTFEVDIRK
TGTSSRRFRH TLTAGHVVLA AGTWGTQRLL HDMRDKGVLP RLSARLGELT RTNSEAIVGA
GRPTVDPEND YSRGVAITSS IHPDENTHIE PVRYGKGSNA MSLLQTIATD GSSPVPRWKQ
ALRFVCKHPI QTLRLLNGYR WSERTVILLV MQSLDNSITT YTKRGWFGRR KYTSKQGHGK
PNPTFIPAGH KANQLTAKHI DGVAGGTWGE IFNIPLTAHF IGGAPIGTDP DNGVIDPYHR
VFNYPNLHVV DGAAITANLG VNPSLTIAAQ AERAFSFWPN KGEADPRPDQ REGYKRIAPV
APKNPVVPAD APGALRLPIT PK
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