| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04580 |
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| Symbol | |
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| ID | 8385796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 449983 |
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| End bp | 451392 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974556 |
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| Product | D-xylulose kinase |
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| Protein accession | YP_003132360 |
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| Protein GI | 257054528 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.399313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ACGATGTGCT GGTGGCTGGG GTCGATTCGT CCACGCAGTC GACCAAAGTG
GTGGTGTGCG ACGCCCGAAC GGGCGCGGTC GTGCGCAGCG GCCGCGCCGA ACACCCGGAC
GCCACCGAGG TGGATCCCGC GGAGTGGTGG ACGGCGTTCA CGGCGGCCAC GGACGGTTTG
TTGGACGGTG TGTCCGCCAT AGGTGTCGCG GGACAACAGC ACGGCATGGT CACGGTGGAC
GAGGACGGCG ACGTCGTCCG CCCGGCGTTG CTGTGGAACG ACACGCGTTC CGCGCAGGCC
GCCACTGACC TCGTGCGTGA ACTCGGAGGA CCGCAGGCGT GGGCGGACGC GGTCGGTTCG
GTGCCCGTCG CCAGTTTCAC GGTCACCAAA CTGCGGTGGC TTGCCGAGCA CGAGCCCGAC
AAGGCCGACA GGGTCGCGAA AGTCATGTTG CCGCATGACT GGCTGACCTG GCGTCTCGTG
GGTGGGGAGC CGGTCACCGA TCGTGGTGAC GCCTCGGGCA CGGGGTACTT CTCGCCCGCC
GAAGGTGCTT ACCGCACGGA CATCCTCACT CGCGCCTTCG GCGGTCGTGC CCCCGAACTG
CCTCGGGTGT TGGCGCCGTC GGAACCGGCG GGGCGCACTT CCGACGGCAT GCTGGTGTCC
GCTGGAACCG GCGACAACAT GGCCGCCGCG CTCGCGCTGG GGGCGGGGGA CGGTGACGTC
GTCGTCTCGC TCGGTACGAG TGGCACGGTG TTCGGTGTGA GCGAGATCCC GGCCGCCGAT
CCCACCGGCA GCGTCGCGGG CTTCGCCGAT GCCACCGGCC GGTTCCTGCC CTTGGCCTGC
ACTCTGAACG CCGCGAGGGT GCTGACCTCC ACCGCCCAGT TCCTGGGGGT CGAGCTGTCG
GAATTCGACC GGCTCGCGCT CAGTGCCGCT CCGGGCGCCG GTGGGTTGAC ACTGCTGCCC
TATCTCGACG GGGAACGCAC CCCCAACCTG CCCGACGCGG CCGGGTCCCT GTTCGGGTTG
CGTCGTACGA ACATGACTCC CGAGAACCTC GCCCGGGCCG CTGTCGAGGG GATGCTGTGC
GGACTCGCCG CCGGGCTCGA CGCGGTACGC GAGTACGGCA TCTCCGTTCG CCGGGTGCTC
CTCATCGGGG GTGCCGCGCA GTCCGAGAGT GTGCGTGCGG TGGCGCCGAT CGTGCTTGGC
GTTCCGGTCG TCATTCCACA GCCGCGCGAG CATGTGGCCG TCGGCGCCGC ACGTCAGGCC
GCGTGGGCGC TCGCGGACAC GGCGGAACCC CCGATGTGGG GGACGGACAT CGCGGTGCGG
CTGCCCGAAC CCTCTGACGA CGTCGCCGCC GAGGGAGAGC GCATCCGACA GCGGCATGCC
GAAGTGCGTC GGCGCGTACA CGACGTCTGA
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| Protein sequence | MTDNDVLVAG VDSSTQSTKV VVCDARTGAV VRSGRAEHPD ATEVDPAEWW TAFTAATDGL
LDGVSAIGVA GQQHGMVTVD EDGDVVRPAL LWNDTRSAQA ATDLVRELGG PQAWADAVGS
VPVASFTVTK LRWLAEHEPD KADRVAKVML PHDWLTWRLV GGEPVTDRGD ASGTGYFSPA
EGAYRTDILT RAFGGRAPEL PRVLAPSEPA GRTSDGMLVS AGTGDNMAAA LALGAGDGDV
VVSLGTSGTV FGVSEIPAAD PTGSVAGFAD ATGRFLPLAC TLNAARVLTS TAQFLGVELS
EFDRLALSAA PGAGGLTLLP YLDGERTPNL PDAAGSLFGL RRTNMTPENL ARAAVEGMLC
GLAAGLDAVR EYGISVRRVL LIGGAAQSES VRAVAPIVLG VPVVIPQPRE HVAVGAARQA
AWALADTAEP PMWGTDIAVR LPEPSDDVAA EGERIRQRHA EVRRRVHDV
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