Gene Svir_04420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04420 
Symbol 
ID8385780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp432363 
End bp432779 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID644974541 
Producthypothetical protein 
Protein accessionYP_003132345 
Protein GI257054513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.916304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.274717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAC CTCAACCGAC GGGTACGGGT TTCGGCGGCT CGTTCTCGTC GGAGTACGGC 
GGGTTCGGCG CGTTCGACGA CGATTCGCCC GCTAAACGTG GCAAGTCACG TAAACCGTGG
ATCATCAGCG CTGTCGTGGT CGTGGTGTTG GCGGCCGCAG GCGGCGCCGC GGCGTGGTTC
AGCGGGATGT TCACAGACGA AGTGCTCGAC CAGGAGTCGC TGCACGAAGG CGTCGCCACG
GTGCTCCAGG ACAGTTACGG CGAGCACGAC GTCAGCAACG TCAGCTGCCC CGCTGACCAG
AAGATCGCCG CCGGGCACAC GTTCAACTGC ACCGTCGACA TCGCCGGCGA ATCGAAGACC
GTGAAGATCC GCATTCTCAA CAACGAACCC GAATACGAAG TCGGCGCACC GCACTGA
 
Protein sequence
MTPPQPTGTG FGGSFSSEYG GFGAFDDDSP AKRGKSRKPW IISAVVVVVL AAAGGAAAWF 
SGMFTDEVLD QESLHEGVAT VLQDSYGEHD VSNVSCPADQ KIAAGHTFNC TVDIAGESKT
VKIRILNNEP EYEVGAPH