Gene Svir_03360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03360 
Symbol 
ID8385674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp335405 
End bp336265 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content70% 
IMG OID644974436 
ProductABC-type Mn2+/Zn2+ transport system, permease component 
Protein accessionYP_003132244 
Protein GI257054412 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.402488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.743005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG ACGACGTCAT GATCGTGGTG ATCGCCGGGC TGCTGTCCAC GTCGTGTGCG 
CTGCTCGGGA GTTTCCTCGT GCTGCGCCGT CAGGCGTTGT TGCCCGACGC GGTCAGCCAC
GCCGTACTGC CCGGCATCGT GTTGGTGTTC CTCCTCACGG GAGACCGTGG GTCGGCGGCG
ACCGTGTTGG GTGCCACCGC GTTCGGAGTG CTGTGCGTGG CCGGTTCGGA GTGGCTTCGA
CGGACCGGGG TGGTGGCCTC CGACGCGGCG TTGGCTCTCG CGTTCCCCGC GTTGTTCTCC
CTCGGCGTCC TGGGCATCAG CGCCTACGCC TCGGGAGCGC ACATCGACCT CGACTCCGCC
ATCTACGGCG ACATCACCTT CGCCCCGCTG CGCACAGTGG ACGTCCTCGG CACCACGGTG
CCCATCTCGT TGCTGGCCAC CGGCCTGACG GCCGGGTGCA CGGTGGTGTT CACCGTGCTG
CTGTGGCGGC CACTGCAGAC GGCGACCTTC GATCCCGACT TCGCCGAGTT GGCCGGACTG
CGGGGCGAGC TCGTGGGACG GATGTTGCTG GTCGTGGTGG TGGGCACGGC CGTCGTCGCG
TTCGACAGTC TCGGCGCGAT CCTGGTGATC ACGTTCTTCG TCGTGCCCGC CGTCACGGCG
CGACTGCTCA CCCGACGCCT CGGCACGATG CTGGTGGTCG CGGTCGCCGC GGGCTGGGTG
AGCTCGTTGG TGGGCCACCG CACGGCGTTG GTGCTCGACT CCTCCATCGC GGGCACCATC
GGCCTGACCA GTGGCGCGCT GTTCGTGCTC GCTTTGGCGT GGCACCGCCT CTTCCGAGGC
CGCGCATCCG CACGGGCCTG A
 
Protein sequence
MTPDDVMIVV IAGLLSTSCA LLGSFLVLRR QALLPDAVSH AVLPGIVLVF LLTGDRGSAA 
TVLGATAFGV LCVAGSEWLR RTGVVASDAA LALAFPALFS LGVLGISAYA SGAHIDLDSA
IYGDITFAPL RTVDVLGTTV PISLLATGLT AGCTVVFTVL LWRPLQTATF DPDFAELAGL
RGELVGRMLL VVVVGTAVVA FDSLGAILVI TFFVVPAVTA RLLTRRLGTM LVVAVAAGWV
SSLVGHRTAL VLDSSIAGTI GLTSGALFVL ALAWHRLFRG RASARA