Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03360 |
Symbol | |
ID | 8385674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 335405 |
End bp | 336265 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974436 |
Product | ABC-type Mn2+/Zn2+ transport system, permease component |
Protein accession | YP_003132244 |
Protein GI | 257054412 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.402488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.743005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCG ACGACGTCAT GATCGTGGTG ATCGCCGGGC TGCTGTCCAC GTCGTGTGCG CTGCTCGGGA GTTTCCTCGT GCTGCGCCGT CAGGCGTTGT TGCCCGACGC GGTCAGCCAC GCCGTACTGC CCGGCATCGT GTTGGTGTTC CTCCTCACGG GAGACCGTGG GTCGGCGGCG ACCGTGTTGG GTGCCACCGC GTTCGGAGTG CTGTGCGTGG CCGGTTCGGA GTGGCTTCGA CGGACCGGGG TGGTGGCCTC CGACGCGGCG TTGGCTCTCG CGTTCCCCGC GTTGTTCTCC CTCGGCGTCC TGGGCATCAG CGCCTACGCC TCGGGAGCGC ACATCGACCT CGACTCCGCC ATCTACGGCG ACATCACCTT CGCCCCGCTG CGCACAGTGG ACGTCCTCGG CACCACGGTG CCCATCTCGT TGCTGGCCAC CGGCCTGACG GCCGGGTGCA CGGTGGTGTT CACCGTGCTG CTGTGGCGGC CACTGCAGAC GGCGACCTTC GATCCCGACT TCGCCGAGTT GGCCGGACTG CGGGGCGAGC TCGTGGGACG GATGTTGCTG GTCGTGGTGG TGGGCACGGC CGTCGTCGCG TTCGACAGTC TCGGCGCGAT CCTGGTGATC ACGTTCTTCG TCGTGCCCGC CGTCACGGCG CGACTGCTCA CCCGACGCCT CGGCACGATG CTGGTGGTCG CGGTCGCCGC GGGCTGGGTG AGCTCGTTGG TGGGCCACCG CACGGCGTTG GTGCTCGACT CCTCCATCGC GGGCACCATC GGCCTGACCA GTGGCGCGCT GTTCGTGCTC GCTTTGGCGT GGCACCGCCT CTTCCGAGGC CGCGCATCCG CACGGGCCTG A
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Protein sequence | MTPDDVMIVV IAGLLSTSCA LLGSFLVLRR QALLPDAVSH AVLPGIVLVF LLTGDRGSAA TVLGATAFGV LCVAGSEWLR RTGVVASDAA LALAFPALFS LGVLGISAYA SGAHIDLDSA IYGDITFAPL RTVDVLGTTV PISLLATGLT AGCTVVFTVL LWRPLQTATF DPDFAELAGL RGELVGRMLL VVVVGTAVVA FDSLGAILVI TFFVVPAVTA RLLTRRLGTM LVVAVAAGWV SSLVGHRTAL VLDSSIAGTI GLTSGALFVL ALAWHRLFRG RASARA
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