Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03230 |
Symbol | |
ID | 8385661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 319989 |
End bp | 321314 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644974423 |
Product | NADH dehydrogenase subunit H |
Protein accession | YP_003132231 |
Protein GI | 257054399 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.332103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGGG CGGAGCTGCT GGCCGACGAT CCACTGTGGT TGATCCTGCT CAAGGCCGTC GTCATCCTGC TGATCGGTCC GATCCTGACC GTCTTCATGA TCGTGTGGGA GCGGAAGGCC CTCGGCCGGA TGCAGAACCG GCCGGGGCCG AACCGGGTCG GCCCGAACGG TTGGTTCCAG TCCATCGCCG ACGCGATCAA ACTGCCGTTC AAGGAACAGG TCATTCCCGA CACGGCCGAT CGCAAGATCT ACTTCCTGGC GCCGATGATC GTGGCGGTTC CCGCGATGAT CGGCCTGGCG GCCATCCCCT TCGGTCCCGA GGTGACGATC TTCGGCGAGC GCACCGTGTT GCAGTTGATC GAACTGCCGG TCAGCGTGCT GTTGATCCTC GCGGGCGCGT CCGTCGGTGT GTACGGCATC ATCCTCGCCG GATGGGCTTC CGGCTCGCCG TACCCGCTGC TGGGTGGCCT GCGGTCGGCG GCCCAGGTGA TCTCCTACGA GATCGCGATG GGGCTGTCGA TCGTCGGTGT GGCGCTGTAC GCGCAGTCGT TGTCGACGGG TGAGATCGTG GCCGCGCAGG AGCACGGCTG GTACTTCTAC CTGTTGCTGC CGAGCTTCGT GATCTATCTG ATCTCGATGG TCGGCGAGAC CAACCGTGCC CCGTTCGACC TGCCAGAGGC CGAGTCGGAG CTGGTCGGTG GTTTCCACAC CGAGTACAGC TCGATGAAGT TCGCGATGTT CTTCCTCGCC GAGTACTGCA ACATGATCAT CGTCTCGGCG TTCGCGACCA CTCTGTTCCT CGGCGGGTGG ATGTTCCCGT TCGTGGGCCT CGACTCGCCG CTGAACCAGG GCTGGTTGCC GCTGCTGTGG TTCTTCGGCA AGACGTTCCT CCTGCTGTTC GGCTTCATCT GGCTGCGCGG CACGTTGCCG AGGTTCCGTT ACGACCAGTT CATGAAGCTC GGTTGGAAGG TGCTCATCCC GGTCGCGCTG ATCTGGGTGA TGGTGATCTC CCTGATCCGG GCCATCCGTA CCGACGGCAC CGTCTCCACC GGCCAGATCC TCGTCGTCGG CGCCATCGTG ATCGCGGTCC TGGTGCTGCT CACGCTGCTG CTGCCGGAGA AGGAAGTGCC CGAAGAGGAC TCCGTGCCGC TCACCGGAGG CGGCTATCCG GTGCCGCCAC TGGACCTCAC GGTGCCCACG ATGACGCCTC GGCAGAAGGC GCTGCGCAAG CAGGAGGCCC GGAAGTCCGT GGAGTCCCAG CAATCCGAGC AGGTCGAACC GGCGTCGGTC AGCTCAGGTA AGGAGGCAAC CGATGGGGAT CTTTGA
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Protein sequence | MTRAELLADD PLWLILLKAV VILLIGPILT VFMIVWERKA LGRMQNRPGP NRVGPNGWFQ SIADAIKLPF KEQVIPDTAD RKIYFLAPMI VAVPAMIGLA AIPFGPEVTI FGERTVLQLI ELPVSVLLIL AGASVGVYGI ILAGWASGSP YPLLGGLRSA AQVISYEIAM GLSIVGVALY AQSLSTGEIV AAQEHGWYFY LLLPSFVIYL ISMVGETNRA PFDLPEAESE LVGGFHTEYS SMKFAMFFLA EYCNMIIVSA FATTLFLGGW MFPFVGLDSP LNQGWLPLLW FFGKTFLLLF GFIWLRGTLP RFRYDQFMKL GWKVLIPVAL IWVMVISLIR AIRTDGTVST GQILVVGAIV IAVLVLLTLL LPEKEVPEED SVPLTGGGYP VPPLDLTVPT MTPRQKALRK QEARKSVESQ QSEQVEPASV SSGKEATDGD L
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