Gene Svir_03230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03230 
Symbol 
ID8385661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp319989 
End bp321314 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content64% 
IMG OID644974423 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_003132231 
Protein GI257054399 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.332103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGG CGGAGCTGCT GGCCGACGAT CCACTGTGGT TGATCCTGCT CAAGGCCGTC 
GTCATCCTGC TGATCGGTCC GATCCTGACC GTCTTCATGA TCGTGTGGGA GCGGAAGGCC
CTCGGCCGGA TGCAGAACCG GCCGGGGCCG AACCGGGTCG GCCCGAACGG TTGGTTCCAG
TCCATCGCCG ACGCGATCAA ACTGCCGTTC AAGGAACAGG TCATTCCCGA CACGGCCGAT
CGCAAGATCT ACTTCCTGGC GCCGATGATC GTGGCGGTTC CCGCGATGAT CGGCCTGGCG
GCCATCCCCT TCGGTCCCGA GGTGACGATC TTCGGCGAGC GCACCGTGTT GCAGTTGATC
GAACTGCCGG TCAGCGTGCT GTTGATCCTC GCGGGCGCGT CCGTCGGTGT GTACGGCATC
ATCCTCGCCG GATGGGCTTC CGGCTCGCCG TACCCGCTGC TGGGTGGCCT GCGGTCGGCG
GCCCAGGTGA TCTCCTACGA GATCGCGATG GGGCTGTCGA TCGTCGGTGT GGCGCTGTAC
GCGCAGTCGT TGTCGACGGG TGAGATCGTG GCCGCGCAGG AGCACGGCTG GTACTTCTAC
CTGTTGCTGC CGAGCTTCGT GATCTATCTG ATCTCGATGG TCGGCGAGAC CAACCGTGCC
CCGTTCGACC TGCCAGAGGC CGAGTCGGAG CTGGTCGGTG GTTTCCACAC CGAGTACAGC
TCGATGAAGT TCGCGATGTT CTTCCTCGCC GAGTACTGCA ACATGATCAT CGTCTCGGCG
TTCGCGACCA CTCTGTTCCT CGGCGGGTGG ATGTTCCCGT TCGTGGGCCT CGACTCGCCG
CTGAACCAGG GCTGGTTGCC GCTGCTGTGG TTCTTCGGCA AGACGTTCCT CCTGCTGTTC
GGCTTCATCT GGCTGCGCGG CACGTTGCCG AGGTTCCGTT ACGACCAGTT CATGAAGCTC
GGTTGGAAGG TGCTCATCCC GGTCGCGCTG ATCTGGGTGA TGGTGATCTC CCTGATCCGG
GCCATCCGTA CCGACGGCAC CGTCTCCACC GGCCAGATCC TCGTCGTCGG CGCCATCGTG
ATCGCGGTCC TGGTGCTGCT CACGCTGCTG CTGCCGGAGA AGGAAGTGCC CGAAGAGGAC
TCCGTGCCGC TCACCGGAGG CGGCTATCCG GTGCCGCCAC TGGACCTCAC GGTGCCCACG
ATGACGCCTC GGCAGAAGGC GCTGCGCAAG CAGGAGGCCC GGAAGTCCGT GGAGTCCCAG
CAATCCGAGC AGGTCGAACC GGCGTCGGTC AGCTCAGGTA AGGAGGCAAC CGATGGGGAT
CTTTGA
 
Protein sequence
MTRAELLADD PLWLILLKAV VILLIGPILT VFMIVWERKA LGRMQNRPGP NRVGPNGWFQ 
SIADAIKLPF KEQVIPDTAD RKIYFLAPMI VAVPAMIGLA AIPFGPEVTI FGERTVLQLI
ELPVSVLLIL AGASVGVYGI ILAGWASGSP YPLLGGLRSA AQVISYEIAM GLSIVGVALY
AQSLSTGEIV AAQEHGWYFY LLLPSFVIYL ISMVGETNRA PFDLPEAESE LVGGFHTEYS
SMKFAMFFLA EYCNMIIVSA FATTLFLGGW MFPFVGLDSP LNQGWLPLLW FFGKTFLLLF
GFIWLRGTLP RFRYDQFMKL GWKVLIPVAL IWVMVISLIR AIRTDGTVST GQILVVGAIV
IAVLVLLTLL LPEKEVPEED SVPLTGGGYP VPPLDLTVPT MTPRQKALRK QEARKSVESQ
QSEQVEPASV SSGKEATDGD L