| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_02600 |
|---|
| Symbol | purU |
|---|
| ID | 8385598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 258847 |
|---|
| End bp | 259725 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644974361 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | YP_003132169 |
|---|
| Protein GI | 257054337 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.304695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGG ACAATCCCCT CGTGCACGAA CGCCAGTACG TCATCACCTT CGGCTGCCCC
GACCGCAAGG GGATCGTCTC CCGCATCTCC TCGTTCCTGG CCGAGATCGG CGGATGGATC
GTCGAGGCCG CCTACCACAC CGATCCGGAC ACGGGCTGGT TCTTCACCCG CCAGGCGGTG
AAGGCCGACT CCGTGCCGTT CGACATCGAC GAGCTGCGGG CCCGATTCGC CGGCGTGGCG
CGCTCGCTGG GCTCGGAGAC CGACTGGAGC GTGGACGACA CCGGACAGCG TCCCCGAGTG
GTGATCCTGG TGTCGAAGGA GGGCCACTGC CTGTACGACC TGCTGGGCCG GGTCGCCTCC
GGTGAGCTCG ACGCCGACGT ACGCGCCGTC ATCGGCAACC ACGACGTGCT CGCCGACATC
ACCCAGGCGC ACGGCATCCC GTTCCACCAC GTCCCCTTCG ACGGTGACGA CGCGAAATCG
TTCGAGCAGA TCGCCAAACT GGTCGACGAG CACGACCCGC ACGCCGTGGT GCTCGCCCGG
TTCATGCGCA TCCTGCCGCC CGAACTGTGC GAGGCGTGGG CCGGCAGGGC CATCAACATC
CACCACAGCT TCCTGCCCTC GTTCGTCGGC GCGCGCCCTT ACCACCAGGC GTACGCCCGG
GGTGTGAAGC TCGTGGGCGC CACCTGTCAC TACGTCACCC CCGAGCTCGA CGCGGGACCG
ATCATCGAAC AGGACGTCAT CCGCGTCGAT CACCGCGACA CGGTGTCGGA CATGGTGCGT
AAGGGCCGGG ACATCGAGAA GGTCACGCTG GCCCGAGGCC TGCGGTGGCA CCTAGAGAGG
CGCGTGCTCG TGCACGGCAA CCGCACCGTG GTCTTCTGA
|
|---|
| Protein sequence | MTRDNPLVHE RQYVITFGCP DRKGIVSRIS SFLAEIGGWI VEAAYHTDPD TGWFFTRQAV
KADSVPFDID ELRARFAGVA RSLGSETDWS VDDTGQRPRV VILVSKEGHC LYDLLGRVAS
GELDADVRAV IGNHDVLADI TQAHGIPFHH VPFDGDDAKS FEQIAKLVDE HDPHAVVLAR
FMRILPPELC EAWAGRAINI HHSFLPSFVG ARPYHQAYAR GVKLVGATCH YVTPELDAGP
IIEQDVIRVD HRDTVSDMVR KGRDIEKVTL ARGLRWHLER RVLVHGNRTV VF
|
|---|
| |