Gene Svir_02530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02530 
Symbol 
ID8385591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp251818 
End bp252816 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID644974354 
Productpredicted NADP-dependent oxidoreductase 
Protein accessionYP_003132162 
Protein GI257054330 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0491149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.895622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGA CGGAGGTCCG GCTCGCGTCT CGTCCGGAGG GGATGCCGAC CCTCGATCAC 
TTCGAGGTCG TCGATGTCGA GGTGCCGAAG CCGGGGCCCG GGCAGGTCCT CGTGCGGAAC
ACGTGGCTGT CGGTGGACCC CTACATGCGG GGTCGGATGA GTTCGGCGAA GTCGTACGTC
GCGCCGTTCG AGGTGGGCGA GGTCATGGAC GGCGGCGCGA TCGGCGAGGT CGTCGAGTCG
AACACCGACG AGTTGGCCGT CGGTGATGTG GTGCTGCACG GCCTCGGTTG GCGTACCCAC
GCCGTGCTCG ACCCGGCTCG GGCGCGCAAG CTCGATCCCT CCGCCGCGCC GGTGCAGGCG
CACCTGAGCG TGCTGGGGAT GCCGGGACTG ACCGCGTACG CCGGGTTGTT CGACGTGGCG
AACATGCGTG AGGGCGACAC GGTGTTCGTG TCCGGTGCGG CCGGGGCCGT GGGTTCGCTG
GTCGGGCAGC TCGCCAAGCT GCGTGGCGCG AAGCGGGTCA TCGGCAGCGC CGGTTCCGCG
GAGAAGGTGC GTTGGCTGCT CGACGAACTG GGCTTCGACG CCGCGTTCAA CTACAAGGAC
GGTCCGGTGC GGGAACAACT GCGCCAGGCC GCTCCCGACG GTGTGGACGT GTACTTCGAC
AACGTCGGTG GGGAGCACCT CGAAGCGGCC ATCGGCGCGT TGAACGTGCA CGGTCGGATC
GCGGTGTGCG GCATGATCTC CCAGTACAAC GCCACCGAAC CGACGCCGGC GCCGCGCAAT
CTGGCCCAGA TCATCGCCAA GCGGTTCACC ATGCGTGGTT TTCTGGTCGG TGACCACGAG
CACCTGCGTC CGACGTTCCT CGCCGAGGTC TCCCCGCTGG TGCGGGACGG CAAGATCGTC
TACCGGGAGA CCGTGGTGGA CGGCATCCGG CAGGCGCCGC AGGCGTTCCT CGACCTGCTC
ACGGGTGGCA ACACGGGCAA GATGCTCGTC CGCCTGTGA
 
Protein sequence
MEATEVRLAS RPEGMPTLDH FEVVDVEVPK PGPGQVLVRN TWLSVDPYMR GRMSSAKSYV 
APFEVGEVMD GGAIGEVVES NTDELAVGDV VLHGLGWRTH AVLDPARARK LDPSAAPVQA
HLSVLGMPGL TAYAGLFDVA NMREGDTVFV SGAAGAVGSL VGQLAKLRGA KRVIGSAGSA
EKVRWLLDEL GFDAAFNYKD GPVREQLRQA APDGVDVYFD NVGGEHLEAA IGALNVHGRI
AVCGMISQYN ATEPTPAPRN LAQIIAKRFT MRGFLVGDHE HLRPTFLAEV SPLVRDGKIV
YRETVVDGIR QAPQAFLDLL TGGNTGKMLV RL