Gene Svir_02500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02500 
Symbol 
ID8385588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp250474 
End bp250773 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content63% 
IMG OID644974351 
ProductProtein of unknown function (DUF2516) 
Protein accessionYP_003132159 
Protein GI257054327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.15354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTTT TCGCATACTG GATCGTCTTG GTCATCGACT GGGCCGGCGT GCTTGTCGGC 
CTTTTCGCTT TCGTGCACGC CGTGACGCAG AGAGCCGATG CCTTCACGGC GGCCGACCGG
TTGAGCAAGC CGGCGTGGAT GGCCATCACG GGTGGTGCGA CCGTCGCGAT GCTGTTGTTC
CAGTTCTACG GTGCCGGCAT GATCTTCTGG CTCGCCGCGC TCGTCGCCAG CCTCGTCTAC
ATCGTGGATG TGCGGCCGAA ACTCATCGAG GTCCAACGAG GCGGCTCGAA CTGGTGGTGA
 
Protein sequence
MPLFAYWIVL VIDWAGVLVG LFAFVHAVTQ RADAFTAADR LSKPAWMAIT GGATVAMLLF 
QFYGAGMIFW LAALVASLVY IVDVRPKLIE VQRGGSNWW