Gene Svir_02380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02380 
Symbol 
ID8385576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp238403 
End bp239194 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID644974339 
Producthypothetical protein 
Protein accessionYP_003132147 
Protein GI257054315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGCA TCGACATCGC TGAACGTGCA GGCGTGGGCC TCGACGGCCT CCCCCGCCCC 
ACCGAGGACC GCGTCGTGAT CACCGCCGAT ACCGTCGTGG TCCTCGACGG TGCGACCGAG
CAGCGTGAGG GGCTGCCCAG CGGAGGCTGG TACTCCCGCC GACTCGCCGA GCAGCTCGAA
ACGCGGCTGC GGACCGACTC GGACGCGGAT CTCACGACTC TGCTGTCCGC CTCGATCCGG
GCCGTGGCCG AGGAACAGGA CCTCGTGCCG CGTCACTCGC CGTCGAGCAC GGTGGCGATG
GTGCGGTGGG GTTCCGAACA CGTGGAGGCG CTGGTACTGG CCGACAGCCC CGTGGTCGCG
TTCACCGCAC ACGGCCCGGA CGTACTGCTC GACGACCGGC TCGACCGGCT CCGAAAGCGA
GGGGCTCTTC GCACTCGGGC CGATGTCGAT CGGCTACGTA ACAGCGAGGG TGGTTTCTGG
GTGGCTGAGG CGATGCCGGA GGCCGCGACC CGCGCATTGC GTCGTCGTTG GTCGCTTGCC
GAAACCGAGG CGGTCGTGCT CGCCACGGAC GGCGTTTCGG TCGGGATCGA CACCTACCGT
GTCCTCGACT GGCCCGACGT GCTGCGGCTG TCCCGGGAGC ACGGCGCGGA CGCCGTGCTC
GACGTCGTCA GGCAGGCCGA GGTCGACGAC GCCGATTGCC GCCGCTGGCC CCGTTCGAAG
CGGCACGACG ATCAGGCCCT CGTCGTGGTC GACTTCACCG AGGACCGGGG AGTAATCAGG
GCCAAACCCT GA
 
Protein sequence
MPRIDIAERA GVGLDGLPRP TEDRVVITAD TVVVLDGATE QREGLPSGGW YSRRLAEQLE 
TRLRTDSDAD LTTLLSASIR AVAEEQDLVP RHSPSSTVAM VRWGSEHVEA LVLADSPVVA
FTAHGPDVLL DDRLDRLRKR GALRTRADVD RLRNSEGGFW VAEAMPEAAT RALRRRWSLA
ETEAVVLATD GVSVGIDTYR VLDWPDVLRL SREHGADAVL DVVRQAEVDD ADCRRWPRSK
RHDDQALVVV DFTEDRGVIR AKP