Gene Svir_02260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02260 
Symbol 
ID8385564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp228949 
End bp229359 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID644974327 
Producthypothetical protein 
Protein accessionYP_003132135 
Protein GI257054303 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.591934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACT CGGTAGTCAA CGAACTGGAC TGGCTGCTCG ACGATTTGGT GAGCCAGGTC 
GCCGGCGCCG AACGGGCTGT CGTGCTGTCG GCCGACGGCC TGCTCATCGG CAGGTCGAGC
AATTTGTCCG AAGAGGACGG CGAACATCTC TCGGCCGTGG CCTCGGCGTT CCAAAGCCTC
GCCCGGAGCA CGGGGCGACA TTTCGGTGGG GGACAGGTCC GGCAGACCGT CGTGGAGATG
GATCACGCGT TCCTGTTCGT GACGGCGGCC GGACGAGGCG CGTGTCTTGC GCTGCTGACG
GCGGAGGACA TCGATATGGG CATGGTCGCG TACGCCATGA ACATGATGGT GAAACGGGTC
GGTGCGGTAC TCAGTGCCGC GCCGCGGGTT GAGCCTCACA CCACGCCATG A
 
Protein sequence
MANSVVNELD WLLDDLVSQV AGAERAVVLS ADGLLIGRSS NLSEEDGEHL SAVASAFQSL 
ARSTGRHFGG GQVRQTVVEM DHAFLFVTAA GRGACLALLT AEDIDMGMVA YAMNMMVKRV
GAVLSAAPRV EPHTTP