Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02220 |
Symbol | |
ID | 8385560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 223350 |
End bp | 224087 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974323 |
Product | ABC-2 type transporter |
Protein accession | YP_003132131 |
Protein GI | 257054299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGC GGCTGTTCGG TGTGGAACTC CTCGACGAGG TACGCGGCAT CGTCCGGGAA CCCACCGCGT TGTTCTTCTC GATCCTGATG CCGGTGGGTT TCTTCGCCCT GTTCGTCTCG ATGTTCGGTC ACCACACGTC CGAGGGCCTG TCCTCGGGTA CGCGGATGTT GGGCACCTTC GGCACGTTCG GCGTGTTGGC CGTGACCTTG TTGAACCCGG GAATCGGTGT GGCACAGGAC CGCCACATCG GCTGGTTACG GATGAAGCGG GTGCAGGCGG TGCCGTTGCC GGTGACGCTC GCGAGCAAGG TGCTCGCCGC ATTGCCGTAC TCGCTCGGGG TACTGCTGGC GATGACCGGC ACCGCGGCGC TGACCGGGAC GCTACAGGCG TCCCCGCTCC AACTGCTGCG CCTGTACGTC GTGTTGTCGT TCGGTGCGAT GCCGTTCGCG CTGCTCGGGG TGGCGGTGGG GTTCCTGGCG GGACCGAACG CCACGACCGC GGTGCTCAAC GCGATCCTGT TGCCGGCCGC GGTCGTGTCA GGACTGTGGC TGCCGTTGGA CCTCCTCCCC GACTTCTTCG GCACCGCAGC GGTGTTCCTG CCGACGTATC ACCTCGCGGA GCTGGCCGTG GCCCAGTTCG CCGACACGGC CTTCACCGGA CATCTCGCGG TGTTGGCCGG GTGGGCCGCA CTCCTGACGG GTGTGGCCGC ACTGGCCTAT CGTCGGGCCC GGCTATGA
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Protein sequence | MNRRLFGVEL LDEVRGIVRE PTALFFSILM PVGFFALFVS MFGHHTSEGL SSGTRMLGTF GTFGVLAVTL LNPGIGVAQD RHIGWLRMKR VQAVPLPVTL ASKVLAALPY SLGVLLAMTG TAALTGTLQA SPLQLLRLYV VLSFGAMPFA LLGVAVGFLA GPNATTAVLN AILLPAAVVS GLWLPLDLLP DFFGTAAVFL PTYHLAELAV AQFADTAFTG HLAVLAGWAA LLTGVAALAY RRARL
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