Gene Svir_02220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02220 
Symbol 
ID8385560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp223350 
End bp224087 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID644974323 
ProductABC-2 type transporter 
Protein accessionYP_003132131 
Protein GI257054299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC GGCTGTTCGG TGTGGAACTC CTCGACGAGG TACGCGGCAT CGTCCGGGAA 
CCCACCGCGT TGTTCTTCTC GATCCTGATG CCGGTGGGTT TCTTCGCCCT GTTCGTCTCG
ATGTTCGGTC ACCACACGTC CGAGGGCCTG TCCTCGGGTA CGCGGATGTT GGGCACCTTC
GGCACGTTCG GCGTGTTGGC CGTGACCTTG TTGAACCCGG GAATCGGTGT GGCACAGGAC
CGCCACATCG GCTGGTTACG GATGAAGCGG GTGCAGGCGG TGCCGTTGCC GGTGACGCTC
GCGAGCAAGG TGCTCGCCGC ATTGCCGTAC TCGCTCGGGG TACTGCTGGC GATGACCGGC
ACCGCGGCGC TGACCGGGAC GCTACAGGCG TCCCCGCTCC AACTGCTGCG CCTGTACGTC
GTGTTGTCGT TCGGTGCGAT GCCGTTCGCG CTGCTCGGGG TGGCGGTGGG GTTCCTGGCG
GGACCGAACG CCACGACCGC GGTGCTCAAC GCGATCCTGT TGCCGGCCGC GGTCGTGTCA
GGACTGTGGC TGCCGTTGGA CCTCCTCCCC GACTTCTTCG GCACCGCAGC GGTGTTCCTG
CCGACGTATC ACCTCGCGGA GCTGGCCGTG GCCCAGTTCG CCGACACGGC CTTCACCGGA
CATCTCGCGG TGTTGGCCGG GTGGGCCGCA CTCCTGACGG GTGTGGCCGC ACTGGCCTAT
CGTCGGGCCC GGCTATGA
 
Protein sequence
MNRRLFGVEL LDEVRGIVRE PTALFFSILM PVGFFALFVS MFGHHTSEGL SSGTRMLGTF 
GTFGVLAVTL LNPGIGVAQD RHIGWLRMKR VQAVPLPVTL ASKVLAALPY SLGVLLAMTG
TAALTGTLQA SPLQLLRLYV VLSFGAMPFA LLGVAVGFLA GPNATTAVLN AILLPAAVVS
GLWLPLDLLP DFFGTAAVFL PTYHLAELAV AQFADTAFTG HLAVLAGWAA LLTGVAALAY
RRARL