Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02120 |
Symbol | |
ID | 8385550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 215492 |
End bp | 216076 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644974313 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003132121 |
Protein GI | 257054289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.19222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.768267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC AGCTCGGCAC TCCCCGGCGG CGCGACGCGG TGAGCAACCG CGCCGCCATT CTGCGAGCCG CCGCCGCGGC GTTCTCCGAA CGCGGCCGGG CCGTGGACGT CAGGGAGATC GCGCGCTGCG CGGGCGTGGG CATGGGCACG CTCTACCGGC ATTTCCCGTC GAAGGACGCG CTGATCGAGA CCTTGCTCAC CGAAAGCTAC GCCCGGTGGG TCGACCAGGC ACGCCGGTCC GCCCGCGCCC GCGCGTCGGC GTGGGAGGCC CTGGAAAGCT TCATCACCGA CGCGCTCACC TTCCAACGGC GCGACCGCGC CGTGTTGGAG AACCTCGCGG CGGCCACCAC CGACGCCACC GGAGTGTCGG TGTGCCAACG GCTGCTGCGC CCCCTCGTCG AGGAACTCGT CACCGCCGCC CACACCGAAG GGGCGCTGCG GCCGGGCGTT CGCGCCGACG ACGTCCTCGC GGTGCTGGCC GCACTCGGAC GCCTCGTGGA GCTGGACACC TCCGCCGAGG CGGTGCGCCG ATGCCTGCAG ATCGTCCTGT CGGGCCTGCG CAACGGTGGC GAGCTGACGC CCTGA
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Protein sequence | MTQQLGTPRR RDAVSNRAAI LRAAAAAFSE RGRAVDVREI ARCAGVGMGT LYRHFPSKDA LIETLLTESY ARWVDQARRS ARARASAWEA LESFITDALT FQRRDRAVLE NLAAATTDAT GVSVCQRLLR PLVEELVTAA HTEGALRPGV RADDVLAVLA ALGRLVELDT SAEAVRRCLQ IVLSGLRNGG ELTP
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