| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01930 |
|---|
| Symbol | |
|---|
| ID | 8385531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 199420 |
|---|
| End bp | 200145 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644974295 |
|---|
| Product | 5-formyltetrahydrofolate cyclo-ligase |
|---|
| Protein accession | YP_003132103 |
|---|
| Protein GI | 257054271 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.472382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGG ATGAGAAGAA ACGAGCTGTC CGCGAGCACG TGTGGGCACT GCTGGAGGAA
CACCGTGCCG CACCGGCTGG TGTGCACGGC CGGATTCCCG CCTTCTTCGG CGCGGAGAAA
GCCGCCGACA GGCTCGCGGA GCTGCCGGAA TGGCAGTCCG CCAAGATCGT CAAAGCGGTG
CCTGACACAG CGCAACAGCC GGTGCGCGCC CGCGCTCTCG ACGAAGGCAA GCTGGTCTAC
ATGGCGGTGC CGAAGCTCGC CGAGCCGAGG CCCTTCTACC TGCTCGATCC GGACACCTTG
CCCGTCTCGC CCGCCGAGGC CGCCGACAAG GGAGCCGCGG CCAAGGTCGG TCAGGCCGTC
GACGTGGACA GCATGCGGCC GCCTGACCTC ATCGTGTGCG GAAGCGTCGC CGTGAACCGC
CACGGCGTGC GCCTCGGCAA AGGCGCCGGA TACTCCGACA TCGAGGTCGC ATTCCTCCAG
GAAGCCGGGC TGATTGGACC CGAGACGACG ATCGTGACCA CCGTGCACGA CCTGCAGGTC
ATCGACGACG ACCTACCCGA AACCAGGCAC GACTTCAGCG TGGACATCAT CGTGACCCCC
ACCACCGTGA TCAGGTGCGA CGAACCACGA CGACCGAGCG GCCTGCTCTG GGACGACCTC
CCGGCGGAGA AGATCGCCGC GATTCCCGCA CTCGCGGCAC GCCTGCGTCA ACAGAGCAAC
GCCTGA
|
|---|
| Protein sequence | MTVDEKKRAV REHVWALLEE HRAAPAGVHG RIPAFFGAEK AADRLAELPE WQSAKIVKAV
PDTAQQPVRA RALDEGKLVY MAVPKLAEPR PFYLLDPDTL PVSPAEAADK GAAAKVGQAV
DVDSMRPPDL IVCGSVAVNR HGVRLGKGAG YSDIEVAFLQ EAGLIGPETT IVTTVHDLQV
IDDDLPETRH DFSVDIIVTP TTVIRCDEPR RPSGLLWDDL PAEKIAAIPA LAARLRQQSN
A
|
|---|
| |