Gene Svir_01840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01840 
Symbol 
ID8385522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp192305 
End bp192970 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID644974288 
Productdienelactone hydrolase-like enzyme 
Protein accessionYP_003132098 
Protein GI257054266 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.470749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA CGCACACGCA GGACTACGAG CGAAGCGACG GACGTCGGTT GAGGCTGACC 
TACGCCGAAC CGGACGGCGC CGTGCGTGGC GGTCTCGTGG TGCTCCACGA GATGGGTGGG
GTGACCGATG CCGCACGGTT TCTGGTGGCC TCGTTGGCCG CGGAGGGCTG GCTGGCGGTG
ACCCCCGAGC TCGGGCGGTT CGACGCCGAC GAGGACGGCG TGGGCCAGGC GGGACAGACG
TTGCTGTCCG CGACCGACAC CGCGTTCGCT TGGTTGGTCC AGCGCGGGGT GTTCGGTGAC
CAACTGGGGG TCGTGGGGTT CGACCTGGGG GGAACGGCGG CCCTGGTGGT GGCGGCCAAT
CGGAAACTGG GGGCCGCGGT GAGTGTGGGC GGCCGTGGTA TCAGCAGTCC GGCCTCGCCC
GCGCTGCCCG CCCTGGTGAA CATCGCCGGG ACGTTGACCA GTCCGTGGCT GGGGTTGTAC
GGCGACAACG GGGACGAGGC CAGCCAGGCG GAGGTGGAGC GGCTGAAGGA GGAGGCGGCC
AAGGCGAAGG TCGCGACCAA CGTGGTGCGG TATCCGGGAG CGAGTCACCG TTTCGACGCC
GACCCCGAGG CCGCTGCCGA GGCGTGGCAG CGCGTGTTGG CCTGGTTCGA CGCCCATCTG
CGTTGA
 
Protein sequence
MTQTHTQDYE RSDGRRLRLT YAEPDGAVRG GLVVLHEMGG VTDAARFLVA SLAAEGWLAV 
TPELGRFDAD EDGVGQAGQT LLSATDTAFA WLVQRGVFGD QLGVVGFDLG GTAALVVAAN
RKLGAAVSVG GRGISSPASP ALPALVNIAG TLTSPWLGLY GDNGDEASQA EVERLKEEAA
KAKVATNVVR YPGASHRFDA DPEAAAEAWQ RVLAWFDAHL R