| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01610 |
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| Symbol | |
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| ID | 8385499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 171709 |
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| End bp | 172908 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974265 |
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| Product | cysteine desulfurase family protein, VC1184 subfamily |
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| Protein accession | YP_003132076 |
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| Protein GI | 257054244 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.129421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.129157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCG ACGTCGCTCG GATACGTGGG TTGTTCCCCG CTTTGGGTGA CGGGTGGATC
CATCTCGACG GTTCGGCCGG CATGTTGGTG CCCGAACAGG TCGCCTCGGC CGTGTCTACC
GCGATGCGTG CGCCCGTGTC CGCCCCCGGC GGAGGGTTCC CTGCGTCGCA GCGGGCGGAA
AGCATCGTCG CGGCCGCACG CCGTGCCGTC GCGGACCTGA CCGGCGCCGA CCCCGACGCC
GTCGTCCTGG GGCCGAACGC GCCCGCGTTG CTGAGCAGGC TCGCGGACAC GCTAGCGGAC
ACCTGGACGC TCGGTGACGA GGTGGTGGTC TCCCGGCTCG ACGAACCGGC GAACACCGAC
CCCTGGTTAC GCGCGATGAA ACGCATCGGG GGCAACGTCC GCTGGAGCGA GATCGACATC
GAGACCTGCG AATTACCCGC ATGGCAATAC GAGCAGCTGG TCGGTTCCCG CACCAAGGCG
GTGTCCGTCA CCGCCGCCTC CGGCTCGGTG GGCACCCGAC CCGACGTGTC CACGATCGCG
GAGATCGCCA AGAAGGTGGG TGCCCTCGTG GTCGTGGACG CCACCTACGC CGCACCGTTC
GTCCCCCTCG ACATCGCCGA GCTCGGCGTG GACGTGCTCG TGCTCTCGGC GCAGGCGTGG
GGTGGTCCGG CGGTGGGGGC GTTGGTGTTC CGGGATCGGG AGCTGCTCGA CCGCATCCCG
TCGATCGCCC TCGATCCGCA CGCCACGGGC CCCGAACGTC TGGAACTCGG CCCGCACGCC
TACCCGTTGC TGGCCGGACT CGTGGCGTCG GTCGACTATC TCGCCGACCT CGACGACGCC
GCCGCCGGGT CCCGGCGGGA CCGGCTGCTC ACGTCGCTGG GGTCGGCGAA GTCGTACCAC
GTGGGCCTGC TCGCCCAACT GTCCACGGAA CTGCGGTCGT TGCCGCACGT GATGCTGATC
GGCGACGCCG CACGGCGCAT CCCCACCCTG GCGTTCACGG TGGCCGACCG CAAGGCCGCC
GACGTCGCCC GGCACCTGGC GTCGAGGAAC GTGTGCGCGT TCGCCGACGA CGGCACCACG
GGGGTGTTCG CCGTGCTCGG GGTCGGTGAG GTCGGCGGCG CCGTGCGGAT CGGACTCGCC
CACTACTCGA ACGTCTTCGA GGTCAACCAG CTGGTGCAGG TGCTGGAGGA ACTGGTCTGA
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| Protein sequence | MAFDVARIRG LFPALGDGWI HLDGSAGMLV PEQVASAVST AMRAPVSAPG GGFPASQRAE
SIVAAARRAV ADLTGADPDA VVLGPNAPAL LSRLADTLAD TWTLGDEVVV SRLDEPANTD
PWLRAMKRIG GNVRWSEIDI ETCELPAWQY EQLVGSRTKA VSVTAASGSV GTRPDVSTIA
EIAKKVGALV VVDATYAAPF VPLDIAELGV DVLVLSAQAW GGPAVGALVF RDRELLDRIP
SIALDPHATG PERLELGPHA YPLLAGLVAS VDYLADLDDA AAGSRRDRLL TSLGSAKSYH
VGLLAQLSTE LRSLPHVMLI GDAARRIPTL AFTVADRKAA DVARHLASRN VCAFADDGTT
GVFAVLGVGE VGGAVRIGLA HYSNVFEVNQ LVQVLEELV
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