| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01420 |
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| Symbol | |
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| ID | 8385480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 153255 |
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| End bp | 155129 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974246 |
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| Product | predicted glycosyltransferase |
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| Protein accession | YP_003132057 |
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| Protein GI | 257054225 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0968148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCGC AGACGGCCCG GTTCTCCGAG CACAAGGGCA CCGGCAGGCT GCTCACGCAG
CGCGGCCTGT TCGCCGGGCC GTCCGATCTG GTGAGCAAGG ACCTCTATGC GGAGATCGTC
GAGGGGGTGG CCACGCGGCG GCGGGAGACC GTCATCCTGG AGCCCTCGGC GCGTGTTTCC
GGTAACACGT ATTTCGGTCG GTTCCCGGCG AGCTACTGGC AGCGCTGGAC CACCGTGAAG
TCGGTGGCGG TCGAGGCCGA GGTCAGTGGT TCCGGACAGC TCGCCGTGCG GGCTTCCGAC
ATGGAGGGCG AGCCGCGGAC CGTGACCGTG CGCACGGTGG AGGACGCCAA GGGCGAGCAC
GTGCGGCTCG ACGCCCCGCT CGACAAGTTC CTCGACGGTG GCGCGCTGTG GCTGGACCTG
GAGACCGAGA GCGGCACGCT CACAGTGTCG AACGTGCGTT GGACCGTCGA TTCGCCGGAG
AAGATCCGGC CGACCGCGGT GACCATCTGC ACGATGAACC GGGCCGACGA CTGCTTGGGC
AACCTGTTCG CGCTGGCTGA TTCGCTGCCC GCGTTGGACA CGTTGGACGC CATCTACGTC
GCCGACCAGG GCACCGACAC GGTGGATTCC CGGGAGGGCT TCGCCGAGGT CGCCGAGCGG
CTCGGGGACA AGCTGCACTA CATCAAGCAG CCGAACCTCG GCGGTGCGGG TGGGTTCACC
CGTGGTCTGT ACGAGGTGGC GGGCAGCACG GACACCGAGC ACGCGAACGT GCTGTTCATG
GATGACGACG TGCTCCTGGA GCCGGATTTG ATCATCCGGT TGACGGCGTT CTCCAACTGC
GCGGCGAACC CGATGATCGT CGGTGGCCAG ATGCTGAACC TGCTGCACCC GCACCAGCTG
CACGTGGGCG CCGAGTACGC CGAGCTGAAC ACGTTGGAGC CGGGACAGCC GGTTCCGCAC
AGCCTGTCCA CGGCGGACCT GCTGGGTGTC GACGAGGAGA CCGGCAAGCC GAACCGCCAG
GAGCGCCGGG TCGACGCCGG CTACAACGGC TGGTGGTCGT GCCTCATCCC GTACGAGGTC
GTGAAGACGA TCGGCTACCC GCTGCCGTTC TTCTTCCAGT GGGACGACGC CGAGTACAGC
TATCGGGCTC GGGCGCACGG GTTCCCGACG GTGACGCTGC CCGGCGCGGG CGTGTGGCAC
GCCGACTTCC ACTGGAAGGA CTGGGACGAG TGGCACCGCT ACTTCAACCT GCGTAACTCG
ATCATCACGG CGGCCCTGCA CAGCCCGTTC GACTTGAACC TGCTCTCGCG GGTGTTGTTG
GCGCAGCTGG TGCGCTACCT GCTGAGCATG CAGTACGGGT TGTCGGCGAC GCTGATCACG
GCGGTGGAGG ACTTCCTGAA GGGGCCGGAC ATCCTGCACG ACGGCGGTGT GGCGGCCATG
AAGCGGATCC GTGAGATCCG GGCGCAGTAT CCGGAGACGA AGCGGTACGC GCCCACCGAG
GTGCCGGGGA TCCCGTCGAA CGACATCAGC ATCATCAACA CCGCGCCCCG CCCGAGCCTG
CAGCGGTTGG TACTGCTCAA GCGGATCATC TACCGGCTGT TGGGCAAGCA CCGTTTCGAG
CTGGGCGCGA TCCCGAGCGA CGAGGCCCAC TGGTGGCACG TGTCGCAGTT CGAGACGGCG
GTCGTCACCG ACGCGTCCCA GGAGGGTGTG CGGGTGCGCC GCTACGACCG GCAGAAGATG
TTCGAGCTGG CCAAGCGGGG CGTGCAGGTG ATCAACCGGT TGCGCAAGGA AGGCAAGGCG
GTGCAGGAGG AGTACAAGCG CGCCCTGCCG CGGTTGACCA GCCGGGAGAA CTGGAAGCGT
CTCTACCAGC TTTGA
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| Protein sequence | MSSQTARFSE HKGTGRLLTQ RGLFAGPSDL VSKDLYAEIV EGVATRRRET VILEPSARVS
GNTYFGRFPA SYWQRWTTVK SVAVEAEVSG SGQLAVRASD MEGEPRTVTV RTVEDAKGEH
VRLDAPLDKF LDGGALWLDL ETESGTLTVS NVRWTVDSPE KIRPTAVTIC TMNRADDCLG
NLFALADSLP ALDTLDAIYV ADQGTDTVDS REGFAEVAER LGDKLHYIKQ PNLGGAGGFT
RGLYEVAGST DTEHANVLFM DDDVLLEPDL IIRLTAFSNC AANPMIVGGQ MLNLLHPHQL
HVGAEYAELN TLEPGQPVPH SLSTADLLGV DEETGKPNRQ ERRVDAGYNG WWSCLIPYEV
VKTIGYPLPF FFQWDDAEYS YRARAHGFPT VTLPGAGVWH ADFHWKDWDE WHRYFNLRNS
IITAALHSPF DLNLLSRVLL AQLVRYLLSM QYGLSATLIT AVEDFLKGPD ILHDGGVAAM
KRIREIRAQY PETKRYAPTE VPGIPSNDIS IINTAPRPSL QRLVLLKRII YRLLGKHRFE
LGAIPSDEAH WWHVSQFETA VVTDASQEGV RVRRYDRQKM FELAKRGVQV INRLRKEGKA
VQEEYKRALP RLTSRENWKR LYQL
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