Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01410 |
Symbol | |
ID | 8385479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 152642 |
End bp | 153094 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644974245 |
Product | predicted membrane protein |
Protein accession | YP_003132056 |
Protein GI | 257054224 |
COG category | [S] Function unknown |
COG ID | [COG2246] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.16312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCGA CGGATTCACA GGCGAGTGAG GTCGAGAGCG CATCGCATGC GCCTTCACCT GGGCTGCTCG CCCAGATCCT GCGGTTCGTC CTCATCGGCG GCTTCTGCGC GCTGGTCGAT TCCGGCCTGT ACTGGCTGTT GCTCCAGGCG GGCGCGTGGG TGCACCTCGC CAAGGCAATC AGTTTCATTG CGGGAACCAC AACGGCCTAT TTCCTTAACA GGCGTTTTAC TTTCACCGCG GCACAAAAGG GTGGGGCTGG GCAGCTCGGC GGATTCATGC TGCTCTACAC AGTGACGTTC TTCGTCAATG TGGGTACGAA TGCATTGGCT CTACACCTGC TGCCGGAGCT GGGATGGCGC ATCGCGCTCG CCTGGATCAT CGCGCAGGGT ACGGCCACAA CCATCAATTT CATCATGCTG AAGTGGGTTG TCTTCCGGGA ACCGCGCGGT TGA
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Protein sequence | MVATDSQASE VESASHAPSP GLLAQILRFV LIGGFCALVD SGLYWLLLQA GAWVHLAKAI SFIAGTTTAY FLNRRFTFTA AQKGGAGQLG GFMLLYTVTF FVNVGTNALA LHLLPELGWR IALAWIIAQG TATTINFIML KWVVFREPRG
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