Gene Svir_01410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01410 
Symbol 
ID8385479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp152642 
End bp153094 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID644974245 
Productpredicted membrane protein 
Protein accessionYP_003132056 
Protein GI257054224 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.16312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGA CGGATTCACA GGCGAGTGAG GTCGAGAGCG CATCGCATGC GCCTTCACCT 
GGGCTGCTCG CCCAGATCCT GCGGTTCGTC CTCATCGGCG GCTTCTGCGC GCTGGTCGAT
TCCGGCCTGT ACTGGCTGTT GCTCCAGGCG GGCGCGTGGG TGCACCTCGC CAAGGCAATC
AGTTTCATTG CGGGAACCAC AACGGCCTAT TTCCTTAACA GGCGTTTTAC TTTCACCGCG
GCACAAAAGG GTGGGGCTGG GCAGCTCGGC GGATTCATGC TGCTCTACAC AGTGACGTTC
TTCGTCAATG TGGGTACGAA TGCATTGGCT CTACACCTGC TGCCGGAGCT GGGATGGCGC
ATCGCGCTCG CCTGGATCAT CGCGCAGGGT ACGGCCACAA CCATCAATTT CATCATGCTG
AAGTGGGTTG TCTTCCGGGA ACCGCGCGGT TGA
 
Protein sequence
MVATDSQASE VESASHAPSP GLLAQILRFV LIGGFCALVD SGLYWLLLQA GAWVHLAKAI 
SFIAGTTTAY FLNRRFTFTA AQKGGAGQLG GFMLLYTVTF FVNVGTNALA LHLLPELGWR
IALAWIIAQG TATTINFIML KWVVFREPRG