Gene Svir_01150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01150 
Symbol 
ID8385453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp120390 
End bp121562 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID644974219 
Producthypothetical protein 
Protein accessionYP_003132030 
Protein GI257054198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGTC GAGCGGACCT GCGGGCATTC CTCCGGACGT TGGATACGGA GACACTGGCC 
GACCTGGTGT GCGAGCAGGC CGATCGAGAC CCGGACCTGC GACGACGACT CGTGGAACGG
GCCGTCACGG CCGGCTTCGA CATCGGGTCG AGCGACGCGG ACACCTCCGT CGACGGTGCG
GACACCGCCG ACAGCGCGCA GACCGACACC GTCCAGCTCG ACTCGGTGCT CGACACGGTG
CAGCGACTGC TCGACGCGGG CACCTCCGCC GACGTCGCCC CCCTGGCCAA AAGGACCGTG
GAGCGGATCG TCGCCGCCGT GGGACGGAAC GACGGACTCC CCGCCGGACT CGCCGACCAG
CTCGATCGGG CCGTGTCGCT GTACGCGCGG GCGTGTGCGG CGCACCCACC GCCGCCGCGG
GAACTCGCCG AATGGCTCAC GCGACTCGCC TTCGAGTGTC CGGGCTGGCC CGAGCCGTGT
CTTGCGGACT TCGCCGACGC GCTCGGTACC GAGGGGTGTG CCCACGTGCG GACGATCGTG
GAGGCCGCGC TCGCCGACAC CGGCGTGGAC GGCGACCGGC GGACGCGCGT GGCACGCGCA
CTGCGGTTGG AGCTCGCCGA GATCACCGGC GACGTCGACA CGGTGGTGAG CCTGTTGTCC
GAACAGTTGC CCCGGCTCGA CGTGAGCCTG CGGATCGTAC GCGTGCTGCG GGCCGCGGGA
CGGCACGCGG AGGCCATCGC CCACGCCGCG AAGGCCCTGG GCAACGCCAC CGGCACGGTG
GGGAACCAGG GCGACGGTCG TGGTCCGGTC GTCGAGGCCC TCGAACGCGT GCGTACCCAA
CAGCCACCCG TCGACATCTC CGACGTCGAA CGCCTCCTGC GCCAGGACCG TTGTGACGAG
GCGTGGAAGG CGACCGCGCG ACACGAGCCC TCCGACGTGA TCCCCTTGTA CCGCGAGCAC
GTCGAGCGTC TCATCGACTC GCGCAACACC CGGCTCTACG AATGCGCGGC GGGGCAGTTG
CGCAGGTTGC GGATGTTGTA CCGGCGTGCG GGCGCGTCCC AGGAGTTCAC CGCGTACCTG
ACGGAACTGC TGGGCCGGCA TCGCCGTAAG ACCCGACTGC TCGACGAGAT CCGCAAGGCC
CGTATCGCGC TGCCCAGGAC CGTCGACGGG TGA
 
Protein sequence
MSCRADLRAF LRTLDTETLA DLVCEQADRD PDLRRRLVER AVTAGFDIGS SDADTSVDGA 
DTADSAQTDT VQLDSVLDTV QRLLDAGTSA DVAPLAKRTV ERIVAAVGRN DGLPAGLADQ
LDRAVSLYAR ACAAHPPPPR ELAEWLTRLA FECPGWPEPC LADFADALGT EGCAHVRTIV
EAALADTGVD GDRRTRVARA LRLELAEITG DVDTVVSLLS EQLPRLDVSL RIVRVLRAAG
RHAEAIAHAA KALGNATGTV GNQGDGRGPV VEALERVRTQ QPPVDISDVE RLLRQDRCDE
AWKATARHEP SDVIPLYREH VERLIDSRNT RLYECAAGQL RRLRMLYRRA GASQEFTAYL
TELLGRHRRK TRLLDEIRKA RIALPRTVDG