| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00880 |
|---|
| Symbol | |
|---|
| ID | 8385426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 90605 |
|---|
| End bp | 91105 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644974192 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003132003 |
|---|
| Protein GI | 257054171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG ACGACTACGG CAGCGTTCGC GGGATCCGAC AGCCGGACCC GACACTCGGC
AAGCGGTTGC GGTCGGTCGA CCCGGAGCGG CCGACCGTGG CCCTGTCGAC GGGGACGACG
TCCCAAGCGG ACGGCCCCGC CAAGCCGCAG AGAAAGCGGG TCGTGCTCGC CGAACCACGG
CGAAGATCCA GCGCGTCGAT GCGGGCGAGG ATCGAGCTGG CCGAGCAGAC GAGCTGGGGG
AAACTGCTGG TCAAGGACCT CGTCAAGGTG CAGTTGCGGG CGGGTCTGTT GTTGTTCGGA
TTGGTGGTGG CGGTGTTGGG GGCGCTGCCA CTGTTGTTCC ACCACGTGCC CGAAGTGACG
ACGTGGCGTG TGATCGGGCT CCCGTTACCG TGGATTTTGC TGGGAATCGT GCCATTTCCG
CTGCTATTCG GGATCGGACT GTGGTACAAC CGGCTAGCGG AGCGACACGA GCGGGATTTC
GTCGCGATGA TCGAGAATTG A
|
|---|
| Protein sequence | MTDDDYGSVR GIRQPDPTLG KRLRSVDPER PTVALSTGTT SQADGPAKPQ RKRVVLAEPR
RRSSASMRAR IELAEQTSWG KLLVKDLVKV QLRAGLLLFG LVVAVLGALP LLFHHVPEVT
TWRVIGLPLP WILLGIVPFP LLFGIGLWYN RLAERHERDF VAMIEN
|
|---|
| |