| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00830 |
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| Symbol | |
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| ID | 8385421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 85004 |
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| End bp | 86416 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974187 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003131998 |
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| Protein GI | 257054166 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.095681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACCG ACTCGGACTC CACATCCGAT CAGCCGGGTC TGATCGAGCG CATCCGCCTG
GGGGACGACG CCGCGTTCAG TGAGCTCTTC CGGGATCACG AAACGGCCGT GCGCAGGTTG
GCCCGTGGAC TCGTGGCCGA CGCCTCCGAG GCCGAGGACG TCACGGCTGA GACGTTCTTC
CGCGTGTTCC AGGCCATCCG CAGGGGCAAC GGACCCAAGG AGAACATCCG TGCCTATCTG
TTGACCGTGG CGAGACGAGT CACGTGGGAG TGGCAGGCCG CCCGCCGGGA CGTGCCCGTC
ACCGACGAGG AACTCATCGC CAGACTCGGC GCGAACACCG ATTGGCTCGA TTGGCAGAGC
CGTACCGCGG AGGCCGCGCT CATCGTGCGT GCGTTCGCCA GCCTCCCCGA ACGCTGGCGC
ACGGTCCTGT GGCGTACCGA GGTCGAAGGG GAACAGCCTG CCGTGGCCGC GCCCCATTTC
GGGTTGAGCG CCAACGCCAC GGCCGCTCTC GCGCGGCGGG CCCGGATCGG TTTGCGTGCC
GCGTACCTGC AGGCGCACTT GGCCGTGGAC CGCAGTCGGG GTAGTTGCCG GGGTGTGGTG
CGCAAGCTCG GCAGTTACGC CGCGGGGGGA GTCACGAATT CGGAGGCGCA CCGGATCAGT
GGCCATCTGA GCGGCTGTTC GTCGTGCCGA TCGGTGTACG ACGAGCTGCG ACGGGTGTGC
TCGAGCCTGC GGACGCACGC GAGCGTCATC GTGGTCCTCG TTCCACTGTC GGGTCTGGCG
TTGACCGCGT CCAGCGCGGG ACTGGGGGCC GCCGTGGCGG CGAGCGCGGG TGGTTCGGCC
ACCGCGGGGG GCGTCGCGGC GGGCGGGGGC GCGGGCGCGG TGGGCGCTGT GGCTCTCGGC
GGTGGCGGCA AGGTCGGGTT GTCGTTCGTG TCCGCGGCCG CGGTCGCGGG CCTGGTGGGT
ACGCCGGTGC TCGACGCGGT CGAATCCGGG CGTGTGGACC CCCCGTTGGA CGTGGACACG
TTCGTCGAGT CGTCGAGTGG CACGGACAAC GACGACGGAC CGTCCTCCGG TACGGGCTCC
GATGTGGTCC GGACCTGGGA GCTTCGGAGG AGCGCGGCCG TGGAGGAACT GGCCGTGTCG
GAATCGGATC CGCTCGAATC GACCAGCGTT CCGTTGGAGG TCGCGGAGTA CACGTTGCCC
GCCGAGAGCG TCGGGGTCGA ATCCCCCGTC GTCGCCATCC CGCCGTCGTC CGTGGTCGCG
GACACGGGTC GGAGTGAACC GTCCGATCCC GTCCCGCCGG AGTCGCCGCG ATCTTCCGAA
CCGGGTGAGG CGCGAGACGA CCGATGCGAC ACGCGATGCG CCGAGCCGGG CGTCGAGCCG
GACGCCGGTG GTCCGACGAA TGTGGACGCG TGA
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| Protein sequence | MLTDSDSTSD QPGLIERIRL GDDAAFSELF RDHETAVRRL ARGLVADASE AEDVTAETFF
RVFQAIRRGN GPKENIRAYL LTVARRVTWE WQAARRDVPV TDEELIARLG ANTDWLDWQS
RTAEAALIVR AFASLPERWR TVLWRTEVEG EQPAVAAPHF GLSANATAAL ARRARIGLRA
AYLQAHLAVD RSRGSCRGVV RKLGSYAAGG VTNSEAHRIS GHLSGCSSCR SVYDELRRVC
SSLRTHASVI VVLVPLSGLA LTASSAGLGA AVAASAGGSA TAGGVAAGGG AGAVGAVALG
GGGKVGLSFV SAAAVAGLVG TPVLDAVESG RVDPPLDVDT FVESSSGTDN DDGPSSGTGS
DVVRTWELRR SAAVEELAVS ESDPLESTSV PLEVAEYTLP AESVGVESPV VAIPPSSVVA
DTGRSEPSDP VPPESPRSSE PGEARDDRCD TRCAEPGVEP DAGGPTNVDA
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