Gene Svir_00600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00600 
Symbol 
ID8385398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp60005 
End bp60598 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content72% 
IMG OID644974164 
Productuncharacterized protein, copper resistance protein CopC-like protein 
Protein accessionYP_003131976 
Protein GI257054144 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.07291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGTC TCGTCGCATT CGTCACCGCC CTCGCAGTCG CGCTGTTGAC GGTGATCACA 
GCGGCGCTTC CGGCGTCGGC GCACAACGTA CTGATCTCGT CGAGCCCCGC CGAGGGCGAG
GAGCTCGACA CCCCGCCCAC CGAGGTGGTC CTCACCTTCG ACCAGCCGGT ACAGGACGCC
GACGTCAACG AGATCGCCGT CACCGGCCCC AACGGGGACC AGTGGGCCGA AGGGACCGTC
GAGGTGGACG GGGCCACGGT GACCGCACCG CTTCGGCCGC TCGGACCGGC CGGGGAGTAC
GTCATCGGCT ACCGCGTGCT GTCGGCCGAC GGGCACCCGG TCTCCGCGGA GATCCGGTTC
ACCCTCACCT CGCCCGGGCC GGGGCAGGCC AGCGGCACCC CCGACAGCGG CCCGAACACG
GACCGGGGTG ACTCGCCGCA GGGCGAGAAC GCCCAGGACG ACGCCACCAC CGACACGGCC
GCCGAACAGG GCGACTCCGA GGGCATCCCC GTGTGGGTGT GGATCGTCGG CGCCGCGGTG
TTGCTGATCG CCGGACTCGT GGTCGCCCTG CGCATGGGCA AATCGCAGGA CTGA
 
Protein sequence
MRRLVAFVTA LAVALLTVIT AALPASAHNV LISSSPAEGE ELDTPPTEVV LTFDQPVQDA 
DVNEIAVTGP NGDQWAEGTV EVDGATVTAP LRPLGPAGEY VIGYRVLSAD GHPVSAEIRF
TLTSPGPGQA SGTPDSGPNT DRGDSPQGEN AQDDATTDTA AEQGDSEGIP VWVWIVGAAV
LLIAGLVVAL RMGKSQD