| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00050 |
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| Symbol | |
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| ID | 8385343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 6142 |
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| End bp | 6795 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974111 |
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| Product | predicted RNA-binding protein containing Zn ribbon |
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| Protein accession | YP_003131926 |
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| Protein GI | 257054094 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00080644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.335319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAACT CTCCACGAGT AGGTGTGGCG GCCTTCAAAA TCCCGAACAG TGGCACAGAG
CGTAACAGTG CGACTGGGTC GAAAGAGCCG GGGGCGGCTT CGACGGCGAC GGGGGCGTCG
ACAAGCCGTC CACAAGGCCG GGACCTCGCC AAAGCCGCGT TACAAGCCGC GAAGGAACGC
GCCGGGACCC GTGGCACGAG GCCGGGTGCG CGTAGGCCCG GCACCCCTCG TACGGGTGGG
CTGGAACACA GTGGGCAGAA TCCACGGCGA CGCCGTTGGT CGGGGCCCGG CTTCGACGAA
CGTGACCCAC AGCCGTTCGG ACGCCTGCTG TCGAACATGG CGACCCAGCT GGGGTGGAGC
GCGCGATTGG CGAACGGCCG GGTCTTCGGC CAGTGGTCGA CGCTCGTGGG GGCGGAGATC
GCCGAGCATG CGCAACCCAT GTCGCTGAAC AACGGTGAAC TGACCGTTCG TGCCAGTTCC
ACCGCCTGGG CCACACAGTT GCGCTTGCTG CAAAGGCAAC TGCTGGCAAG AATCGCAGCG
GGCGTCGGAC ATGGCGTGGT CACCAGGATG CGTATTCAGG GGCCGACGGC TCCGAGCTGG
CGCAAGGGGC CGAAGCACAT TCCCGGACGG GGTCCTCGCG ACACCTACGG TTGA
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| Protein sequence | MENSPRVGVA AFKIPNSGTE RNSATGSKEP GAASTATGAS TSRPQGRDLA KAALQAAKER
AGTRGTRPGA RRPGTPRTGG LEHSGQNPRR RRWSGPGFDE RDPQPFGRLL SNMATQLGWS
ARLANGRVFG QWSTLVGAEI AEHAQPMSLN NGELTVRASS TAWATQLRLL QRQLLARIAA
GVGHGVVTRM RIQGPTAPSW RKGPKHIPGR GPRDTYG
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