| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00040 |
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| Symbol | recF |
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| ID | 8385342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4827 |
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| End bp | 5999 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974110 |
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| Product | recombination protein F |
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| Protein accession | YP_003131925 |
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| Protein GI | 257054093 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000332989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.373412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATCTGC GGCACCTCCA GGTGACCGAT TTCCGGTCGT GGGAGCACGT GGATCTCCCG
CTCGCACAGG GACCCACCGT GCTGGTGGGC CCCAACGGGC AGGGAAAGAC CAACCTGCTC
GAGGCCATCG GATACATCTC CACGTTGAGT TCGCATCGGG TGGCCACGGA CGCACCGTTG
GTGCGACACG GTTGTGATCG CGCGTTGGTA CGTGCCGCGG TGGTGAACGA GGGACGGGAA
CTCACCGTCG AGCTGGAGAT CGCACCGGGC CGGGCCAACC GCGCTCGGAT CAACCGCGGC
GCGGTCGGCA AACCACGTGA CGTGCTCGGC ATCCTTCGGA CGGTGTTGTT CTCCCCGGAG
GATCTGGCAC TCGTGCGCGG TGATCCCTCC GAACGACGGC GGTTCCTGGA CGACCTGCTC
GTACAACGCG CTCCGCGATA CGCGGGGGTC CGTTCGGAAT ACGACCGTGT GCTGCGGCAG
CGCAACGCCT TGTTGAAGAG CGTGGGTCGC GCCGGTGGGC GTCGGGGAGC CCGGGAGGAG
ACCGATCCGT ACGCGTTGTC CACGCTTCAG GTGTGGGACA ACCACCTGGC TTCCGCGGGG
GCCGAGTTGT TGGCAGCGCG GCTCAATCTG GTCGCCGAGC TGGGGCCCTA TGTGGCTTCG
TCCTATGCGG ACGTGGCTCC CGACTCCCGA CCTGCCCGGA TCGCCTACCG CTCCAGCCTG
GGGGGTGCGT TGCCGGAGGG TTGGGGGACG CCCGACGGAC CGGAAGCGTC GACGGAGCAG
CTCGGCGAGA TCCTGCTCCG GGTGCTCGGT GAGGTCCGGG AGACCGAGCT GGAGCGCGGG
GTGAGTCTCA TCGGGCCGCA CCGGGACGAT CTCGAGTTGA TGTTGGGCGA GGCCCCCGCG
AAGGGTTATG CGAGCCACGG GGAGTCGTGG TCGTTCGCGT TGGCGCTACG ACTAGCGTCG
TATCGGCTCT TGCGGAACGA GTCGGGCGGT GAACCGGTGC TGCTGTTGGA CGACGTGTTC
GCCGAGCTCG ACAGCAGGCG TCGGGCCCGA TTGGCCGAGG TGGCGACGAA GGCCGAGCAG
GTGTTGGTGA CGGCGGCCGT CGACGAGGAC GTACCCGTCG AATTCGCAGG CGTACGGTAT
GCGGTCTCGA ACGGCGAGGT GACACGTGCC TGA
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| Protein sequence | MYLRHLQVTD FRSWEHVDLP LAQGPTVLVG PNGQGKTNLL EAIGYISTLS SHRVATDAPL
VRHGCDRALV RAAVVNEGRE LTVELEIAPG RANRARINRG AVGKPRDVLG ILRTVLFSPE
DLALVRGDPS ERRRFLDDLL VQRAPRYAGV RSEYDRVLRQ RNALLKSVGR AGGRRGAREE
TDPYALSTLQ VWDNHLASAG AELLAARLNL VAELGPYVAS SYADVAPDSR PARIAYRSSL
GGALPEGWGT PDGPEASTEQ LGEILLRVLG EVRETELERG VSLIGPHRDD LELMLGEAPA
KGYASHGESW SFALALRLAS YRLLRNESGG EPVLLLDDVF AELDSRRRAR LAEVATKAEQ
VLVTAAVDED VPVEFAGVRY AVSNGEVTRA
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