| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_3025 |
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| Symbol | |
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| ID | 8385336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 3115209 |
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| End bp | 3116060 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974104 |
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| Product | shikimate kinase |
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| Protein accession | YP_003131919 |
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| Protein GI | 257054086 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGGA CGGCTGTCGC ACCGGCCGCC GGGACGGTCC TCAACGCCCT CGCGACGGGC
ACGGGGTCGG CGTTCGCCAT CGACGCGGAG TTGCGCGCCG AGGTAACCCT CGAAGCGGAC
GGCGGGGTCA GCGGGACGAT CGCAGGCGAG CCCGATGCCG ACACGGCCTT GATCGAACAT
TGCGTCGAGC TGGTCACCGA GCGATTCGGC GATGGTGAGG GCGGGAGCGT CCGCACGGAG
AGCGATATTC CGCTGGCTGC CGGCCTGAAG AGTTCGAGCG CGGCGGCAAA CGCGACCGTG
CTGGCAACGC TGTCGGCGCT CGATGCCGAC TCGGCGGTGT CCCGAGTTGA CGCCGCACGC
ATCGGCGTCC AGGCGGCCAG AGACGCCGGC GTCACCGCGA CCGGTGCGTT CGACGACGCG
AGTGCGAGCA TGCTCGGGGG CGTGACTGTG ACGAACAACC ACGAGGACGA ACTGCTCGCC
CGCGAGACCG TCGAGTGGGA CGTGCTCGTC TGGACGCCGC CCGAGCGGGC CTACAGTGCC
GAGGCGGACA TCGAGCGCTG TCAGCAAGTC GCCCCGATGG CCGAGCTGGT TGCCGACCTC
GCGCTCGATG GCGCATACGA GCGAGCGATG ACAGTCAACG GCCTGGCGTT CACGGCGGCA
CTGGGGTTTT CGGCCGAACC GCTGCTCGAG GCGATGCCCC ACGTCGCGGG CGTCTCGCTA
TCGGGGACCG GGCCGAGCGT GACGGCAGTC GGGAACCGGG ACGATTTAGA ACGCGTCCGC
GCAATCTGGG AACAACGAGA GGGCACGACA TGGCTAACAA CGACACAGAC CGACGGTACC
CGGACGAGAT GA
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| Protein sequence | MEGTAVAPAA GTVLNALATG TGSAFAIDAE LRAEVTLEAD GGVSGTIAGE PDADTALIEH
CVELVTERFG DGEGGSVRTE SDIPLAAGLK SSSAAANATV LATLSALDAD SAVSRVDAAR
IGVQAARDAG VTATGAFDDA SASMLGGVTV TNNHEDELLA RETVEWDVLV WTPPERAYSA
EADIERCQQV APMAELVADL ALDGAYERAM TVNGLAFTAA LGFSAEPLLE AMPHVAGVSL
SGTGPSVTAV GNRDDLERVR AIWEQREGTT WLTTTQTDGT RTR
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