Gene Huta_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_3005 
Symbol 
ID8385314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp3096061 
End bp3096711 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID644974083 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003131899 
Protein GI257054066 
COG category[K] Transcription 
COG ID[COG1777] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00979308 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCG CCGAGTTACT CGATCTCCTG GGGAATGCGA ACCGTCGACG CATCTTGCGT 
CTGCTTGCTC GCAAGCCCTG TTACGTCACG GAGATCAGCG ACTACCTCGG CGTGAGCCCG 
AAGGCCGTCA TCGATCACCT GCGACAACTC GAAGAGGCTG GCCTCGTCGA GAGCCGAACC 
GACGAACGTC GCCGCAAGTA CTTTTACATC TCCCGGGGTT TCCGGCTCGA AGTCACCGCA 
TCGCCGTACG ACTTCGGGAC CAAAACGGCG TATCCCGCCA GTTCCGGGCT GGACATCACT 
TCGTGTAAGC ATCTCTCTAT CGACGTCGAC CCCGACGGCG CGTCCGAGTT GCCGGAACTC 
GCCGTCGAGA TGCGCCGGTT ACGACGGCTT CGAAACGAAC TCTCGCTCGC TCAGCGATGG 
GTACAGGGTC GATTGACGGA CGTCATGGAA CAGGTCAGCG ACGAGATCGA CGACAGCGAC 
GATCGGCTCT ACGTCGAAGT GATGGGGGCC ATCGCCGACG GCGGTGCCGA TCTGGAGTCC 
ATCAGCCGAC AGGTGGAAGT GCCGCCGCCG GTCGTCGAGG ACATTCTCGG ATCGCTGCAA 
TCGCGTGGCG TGGTCGAGCG TGACGGCGAC CAGTGGGTGC TGGGGCGCTG A
 
Protein sequence
MESAELLDLL GNANRRRILR LLARKPCYVT EISDYLGVSP KAVIDHLRQL EEAGLVESRT 
DERRRKYFYI SRGFRLEVTA SPYDFGTKTA YPASSGLDIT SCKHLSIDVD PDGASELPEL 
AVEMRRLRRL RNELSLAQRW VQGRLTDVME QVSDEIDDSD DRLYVEVMGA IADGGADLES 
ISRQVEVPPP VVEDILGSLQ SRGVVERDGD QWVLGR