| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2931 |
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| Symbol | |
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| ID | 8385240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 3018038 |
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| End bp | 3020230 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974009 |
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| Product | nucleic acid binding OB-fold tRNA/helicase-type |
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| Protein accession | YP_003131825 |
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| Protein GI | 257053992 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1107] Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.522801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTCGT GTATCATCTG CGGTACGTCT GTCGAAGGGC ACATCTGTGA CATCCACGAA
GAAGACGCAG TCTTCGAGTT TCGCGGGAGT ACACCCGACG AACTGACGCC GGGTCGATAC
TACCGCGGTA CGGTCGACGG CTTCGCCGAG TTCGGCGTCT TCGTCGACAT CGGCGATAGC
GTCACTGGAC TGTTACACGA GAGCGAACTG GATAGTCGAC TTGAAAGTCT CAGCTGGCAA
CCCGGCGATA CCGTCTACGT GCGCGTCACG AACGTGCGCG ACAACGGTAA CGTCGACCTC
AGCTGGTCGA TCCGGCAGGC CGACGACGAG TTCCGTGGCG TCTTGATCGA CGACCCGGAC
GAGGATCACG AGTTGTTGCC CGAAGAGACC GACGAGCCGA TAGACGAACA GTCGACGCCC
GACGAGAGTC CTGAATCAAC CGAGTCCGAA TCGACGGACT CGAAACAAAC TGACGCGACG
ACAACAGGCG CTGTGCGGAC GCGAGAAGAC TCACAGACCG GCGGCGGAGC CGTCGGCCTC
GAAGAGTCTG AGTCGGCATC AGCTGCGGAC GAATCGGCCT CGGCTGGGTC AGCGGACGTC
GAAGGAACTG CCGACGAAGA CGTCGAAGAT GAGCCAGCAG AAGCCGAACG GACGCCCGAA
CCGCCGAGCG TCGACGTCGG CGACCTCGAG GGGTGGATCG GCGACACCGT CCGGATCACC
GGCGAGATCG TCGACGCCCG CCAGACGAGT GGGCCGACGG TGTTCGAACT CCGGGACGGC
ACCGGCAGCG TCGACTGTGC GGCCTTCGTC GAGGCCGGCG TCCGCGCGTA TCCGAGTGTC
GAGGAAGGTG CCGTCGTCGA GATCGACGGC GAAGTCCGCG AACGTCGCGG CGAGCTCCAG
GTCGAGACCG AGGAACTGGA ACTGTTCGAC GAGGACAAAC GCGAGGCAGT CCTCGAAGAG
ATCGAGGCGA CGCTCAGCGA GCGCGCCCGG CCCGACGAGA TCGACCCGCT CGTCGCCGAC
GAGGCGGTCG CCGCCGAGAG CGAATCGATC CGGGACGTCG TCGGCGAGAT CCGGCGGGCC
GTCCTTGAGG ATCGCCCGGT GATCGTCCGC CACAGCGCCA CGACTGACGG ATACGTCGGG
GGCGCGGCGA TCGAGCGCGC CGTCCTGCCG CTGGTTCGCG ATCGCCACGA CCGTCGTGAC
GCGGAGTACC ACTACATCGA TCGACGGCCC ATTGAGGGCG ACGTCTATGG CCTCGACGAC
GCGACCACCG ACGTGACGCG GATGCTCGGA GACCGCGAGC GTCACGACGA GAATCTGCCG
CTACTGGTGT TCGTCGCCGC CGGTGGCACC GAAGAGTCGC TCGACGGATT CGAACTGCTT
GATGTCTACG ACGCGTCGAA AGTGGTCATC GACACCGTCG CCGAATCGAC CATCGTGGAC
ACGGTCGACG CGGCACTCGC TCCGAAGGCC GACGCGACCT CGGTCGCCAT CGCCGACGGA
ACGACCCGCG GGCCGACCGC GAGCGCGCTT GCGGCGACGG TCGGTGCCCA CGTCGAGGAA
GACGTCCGAC CCGATCTGGC GCACCTGCCG GCTGTGAGTT ACTGGGGCGA GGTCCCCGAG
GCCTACGCCG CGGCCGCCGC CGAGGCGGGC TACGATGGGA CGGCCGTCAG CGAGATCCGC
GAGGCAGTTG CGCTTGAAGC CTATTACCAG TCCTACGAGG ACAAGCGCGA ACTCGTCACG
GACCTGCTCT TTGGCGGCCG CGAGACGACC GACGCCGACG TGCGCGGGCT GGCGAGTCAC
GTCAGCGAGC AGTTCCGCGA AAAGCTCGAC GTCGCCGTCG AGACCGCCCA GGAGAACCTC
GACCGACGCA GTGTCGGCGA CGAAACGATC GGTGTGCTTG ACATCGATCG CTTCACCCAC
ACGTATGACT TCCCGCCGGC GACGCTGCTG CTCGACGAAC TCTACCGCCG GAGTGACGAT
CTGACAGCGA TCGTCGGCGT CGACGAGGAC GAACTCCACG TCCGGAGCGG CCACGAACTC
GACGTGCGCG AACTCGTCGA CGCGGCCGAC GAGACTGTCG AGGGGGCCGA CCTCGAACCG
CTCAGCACCC GCTCGCATCG CATCGAGTTC CTCGCCGGCC AGCGCTCGAC GGTCGTCGAC
GCCGTGCTCG ACGCGATCGT CGACAGCGTC TGA
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| Protein sequence | MGSCIICGTS VEGHICDIHE EDAVFEFRGS TPDELTPGRY YRGTVDGFAE FGVFVDIGDS
VTGLLHESEL DSRLESLSWQ PGDTVYVRVT NVRDNGNVDL SWSIRQADDE FRGVLIDDPD
EDHELLPEET DEPIDEQSTP DESPESTESE STDSKQTDAT TTGAVRTRED SQTGGGAVGL
EESESASAAD ESASAGSADV EGTADEDVED EPAEAERTPE PPSVDVGDLE GWIGDTVRIT
GEIVDARQTS GPTVFELRDG TGSVDCAAFV EAGVRAYPSV EEGAVVEIDG EVRERRGELQ
VETEELELFD EDKREAVLEE IEATLSERAR PDEIDPLVAD EAVAAESESI RDVVGEIRRA
VLEDRPVIVR HSATTDGYVG GAAIERAVLP LVRDRHDRRD AEYHYIDRRP IEGDVYGLDD
ATTDVTRMLG DRERHDENLP LLVFVAAGGT EESLDGFELL DVYDASKVVI DTVAESTIVD
TVDAALAPKA DATSVAIADG TTRGPTASAL AATVGAHVEE DVRPDLAHLP AVSYWGEVPE
AYAAAAAEAG YDGTAVSEIR EAVALEAYYQ SYEDKRELVT DLLFGGRETT DADVRGLASH
VSEQFREKLD VAVETAQENL DRRSVGDETI GVLDIDRFTH TYDFPPATLL LDELYRRSDD
LTAIVGVDED ELHVRSGHEL DVRELVDAAD ETVEGADLEP LSTRSHRIEF LAGQRSTVVD
AVLDAIVDSV
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