| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2656 |
|---|
| Symbol | |
|---|
| ID | 8384961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2728785 |
|---|
| End bp | 2729498 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644973730 |
|---|
| Product | RNA methyltransferase, TrmH family, group 1 |
|---|
| Protein accession | YP_003131550 |
|---|
| Protein GI | 257053717 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGA GCGTCGCCGT CGTCGATGCC CAGACCCCGG GCAACGTCGG GACGATCGCC
CGCGCGATGA AGAACTTCGG CCTCTCGGAT CTCAAACTGG TCGACCCGCC CGAACTCGAT
CCCGACGGGG AGGCCTACGG CTACGCCGGT CAGGCCCGCG ATGACATCAT GCCCAGCGCC
GACGTGGTCA CCTTCGAGGA GATAGTCAAC AACTACCATA CCGTTGCGAC GACGGCGATC
ACCAACGAGG ACGCGACCAA GCACGTCCGG TATCCCTTCG TGACGCCGCG GGAACTCGGA
GAGGAACTCA AGGGAATAGA CAGCGACGTC TGCCTGGTCT TCGGCCGCGA GGACGTCGGT
CTCTCCAACG AGGAACTCGC CGAGGTCGAC CAGATCTGTT CGATCCCCGC CAGCGACGAC
TACCCGGTCC TGAACCTGGG CCAGGCCGCG ACGATCGTGC TCTACGAACT CCGGGCGCTG
ACCGTCGAGG AGACGCAGCT GCCCGAGATC ACCGACCGGG CCGACCAGCC GGCCATCGAG
GGGCTACACG ACCAGTTCGG GAGCTTCCTC GAGGTGATCG ACCACCCCGA GGAGAAGCGA
GCGAAGGCCG GCCGGCTCTT CCGGCGGGTG ATCGGGCGTG CCCATCCGAC AGGGCGGGAG
GTTCGGACGT TGCGAGGGCT CTTCAGGCGC GTCGAGCAGA AACTGGAGGA CTAG
|
|---|
| Protein sequence | MNVSVAVVDA QTPGNVGTIA RAMKNFGLSD LKLVDPPELD PDGEAYGYAG QARDDIMPSA
DVVTFEEIVN NYHTVATTAI TNEDATKHVR YPFVTPRELG EELKGIDSDV CLVFGREDVG
LSNEELAEVD QICSIPASDD YPVLNLGQAA TIVLYELRAL TVEETQLPEI TDRADQPAIE
GLHDQFGSFL EVIDHPEEKR AKAGRLFRRV IGRAHPTGRE VRTLRGLFRR VEQKLED
|
|---|
| |