Gene Huta_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2512 
Symbol 
ID8384814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2582527 
End bp2583507 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content64% 
IMG OID644973586 
Productflap endonuclease-1 
Protein accessionYP_003131409 
Protein GI257053576 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID[TIGR03674] flap structure-specific endonuclease 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAACG CCGATCTCCG GGATATCGCC GTCATCGAGG ACGTCAGCTT TGACGTGTTG 
GAGGGCTCGG TCGTCGCCGT CGACGCCCAC AACTGGCTGT ATCGGTATCT CACGACCACG 
GTCAAGTGGA CGAACGACGA CATCTATACG ACTGCGGACG GAACGGAAGT CGCCAATCTT 
GTCGGCGTCG TCCAGGGCCT GCCGAAGTTT TTCGAGGCCG ACGTCACGCC CGTGTTCGTC 
TTCGACGGCG CAGTCACGGA CCTCAAGGAC GACGAGGTAC AGCGTCGGCG CGAGCAGCGC 
GAACAGTACG AGGACCAACT CGAAGACGCT CGCGAAGCGG GTGACGCGGT CCGGGTAGCC 
CGTCTCGAAT CCCGGACCCA GCGACTCACC GACGTCATTC TGGAGACGAC TCGTGAACTC 
CTCGCGCTGC TCGACGTGCC GACCGTCGAC GCCCCAGCCG AGGGGGAAGC GCAAGCCGCC 
CACATGGCCC GGCGGGGCGA TGTTGACTAC GTTGGCACCG AAGACTACGA CGCCCTCCTC 
TTTGGCGCAC CCTTCACGCT CCGGCAACTC ACCAGTTCTG GTGACCCCGA GCTGATGGAC 
TTCGAGGCGA CGCTTGCGGA ACACGACCTC TCCTGGGAGC AACTCGTCGA CGTCGCCCTG 
CTCTGTGGGA CGGACTTCAA CGATGGTGTC CGGGGTTACG GCCCCAAGAC AGCGGTCAAA 
GCCGTTCGCG AGCACGGCGA TCTCTGGGGC GTCAGCGAGA ACGAGGACGT CTACGTCGAG 
AACGCCGATC GGATCCGCGA GCTGTTTCTC GATCCCGCCG TCACCGAGGA GTATACCATC 
GAGACGAGTA TCGACCCTGA TCTGGCAGCC GCCCGCGAGT TCGTCACCGA CCAGTGGGCG 
GTCGACGCCG AGGAAGTCGC TCGCGGGTTC GAACGGATCG AATCGTCGGT CGTCCAGACG 
GGCCTGGAAG ACTGGACCTG A
 
Protein sequence
MGNADLRDIA VIEDVSFDVL EGSVVAVDAH NWLYRYLTTT VKWTNDDIYT TADGTEVANL 
VGVVQGLPKF FEADVTPVFV FDGAVTDLKD DEVQRRREQR EQYEDQLEDA REAGDAVRVA 
RLESRTQRLT DVILETTREL LALLDVPTVD APAEGEAQAA HMARRGDVDY VGTEDYDALL 
FGAPFTLRQL TSSGDPELMD FEATLAEHDL SWEQLVDVAL LCGTDFNDGV RGYGPKTAVK 
AVREHGDLWG VSENEDVYVE NADRIRELFL DPAVTEEYTI ETSIDPDLAA AREFVTDQWA 
VDAEEVARGF ERIESSVVQT GLEDWT