| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2504 |
|---|
| Symbol | |
|---|
| ID | 8384806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2576929 |
|---|
| End bp | 2578491 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644973578 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_003131401 |
|---|
| Protein GI | 257053568 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.177282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGAA CTGTTCTGGT CGCCGGGACG GCCAGTCACG TCGGCAAAAG TACGATCGTC
GCCGGACTTT GCCGGCGGCT GGCCGACCAA GGCGTCTCCG TCGCGCCGTT CAAGGCCCAG
AACATGTCCA ACAACGCCCG GGTGGGATTC AAACCGGGTG CGGTCGGGAC CGTCGGTGAG
GGCGGTGACA GCGAACTCGC GGACGGCGAT CCTGACGCCT ACGGCGAGAT CGGCATTGCA
CAGTACGTCC AGGCCCGGGC CGCCGGCGTG GTACCGACGA CCGATCACAA TCCAGTCCTG
CTCAAACCGC GAGGGGACGG CGAGAGTCAA CTGGTCATCG ACGGCGAGGC CGTGGGCCAC
TTCGCCGCGG GGACGTACTA CGACGACCAC TGGGACCGCG CCCGTCGGGC CGCCCGCCAG
GCCTACAATC GGCTCGCCGC CCGCCACGAC GTGATCGTCG CCGAAGGCGC GGGCTCGATC
GCCGAGATCA ACCTTCAGGA TCGCGATCTG GCGAACGTCG AGACCGCGCG CTTCGCCGAC
GCGTCGATCC TGCTGGTCGG CGACATCGAA CGCGGTGGCG TCTTCGCCAG TCTCTACGGG
ACGCTCGAAT TGCTTCCCGA GGATCTCCGT GACCGAGTGG CCGGGCTCGT GATCAACAAG
TTCCGGGGCG ATCGTTCACT GCTCGAACCC GGCCTTGCGG CGATCGAAGA ACGGACGGGC
GTCCCGGTCG TTGCCGTCCT GCCTCACGAC GATCCCGGAT TGCCCGCAGA AGATAGCCTG
TCGCTCCCGT CGGCGGGCGA GCGCGGCACG TGGGGCGATG AGGATGGTGT CCCGCCGGAC
GACTGCGTCA CGGTCGGCGT CCCGCGACTT CCACACCTCT CGAACGTGGC CGACGTGGCA
CCGCTGGCCC GTGAACCGGG CGTCCGCGTC GAGTTCCTGC CACTCGACAG TGGGGCCGCG
ACCGCTGACG CGCTCGCTCT GCCGGGGACG AAGAATACCG TCGACGACCT GCTTGCAGTA
CGGGACTCAC GACTCGGTGC TGCAATCAGT GCGTTCGACG GGCCGATCGT GGGGATCTGT
GGCGGCTATC AGTTACTCGG CGAGCGGCTC CGGAACGTCG GCGTCGAGAG CACGACGGCG
ACCGGGACGG TCGCTGGCCT TGAGCTGCTT CCCGTCGAGA CCCATTTCTC GGCCGAGAAG
CGTGTAACTG CGGGGACCTA CGAGGCGACA GGTGTCGGCC CGATCGCGGG TGCGACGGGG
ACCGTCTCGG GATACGAGAT CCACATGGGC GAGACGACAG TTCCGGACGG TGTGGCCCGA
CCTATCGGCC CGGAGAGCGT CGCGAACCAG CAGGTACTCG GGACGTATCT CCACGGCTGC
TTCGAGAACC GGAGACTCCG GGACGCGTTC GTCGAGAACG TCTTCGAGCA GGCCGGCGTG
GAGCGTCCCG AGCGCACAGT AGCGCAGAGC GATCCCTTCG ATCGCGCTGC CGAGCTGGTC
GAACCCATCG ACCTCCCGGC GGTGGTTCCG TCAGTCGCGG AGACGAGTGG ACGCGACCAG
TAA
|
|---|
| Protein sequence | MGRTVLVAGT ASHVGKSTIV AGLCRRLADQ GVSVAPFKAQ NMSNNARVGF KPGAVGTVGE
GGDSELADGD PDAYGEIGIA QYVQARAAGV VPTTDHNPVL LKPRGDGESQ LVIDGEAVGH
FAAGTYYDDH WDRARRAARQ AYNRLAARHD VIVAEGAGSI AEINLQDRDL ANVETARFAD
ASILLVGDIE RGGVFASLYG TLELLPEDLR DRVAGLVINK FRGDRSLLEP GLAAIEERTG
VPVVAVLPHD DPGLPAEDSL SLPSAGERGT WGDEDGVPPD DCVTVGVPRL PHLSNVADVA
PLAREPGVRV EFLPLDSGAA TADALALPGT KNTVDDLLAV RDSRLGAAIS AFDGPIVGIC
GGYQLLGERL RNVGVESTTA TGTVAGLELL PVETHFSAEK RVTAGTYEAT GVGPIAGATG
TVSGYEIHMG ETTVPDGVAR PIGPESVANQ QVLGTYLHGC FENRRLRDAF VENVFEQAGV
ERPERTVAQS DPFDRAAELV EPIDLPAVVP SVAETSGRDQ
|
|---|
| |