| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2494 |
|---|
| Symbol | |
|---|
| ID | 8384796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2568591 |
|---|
| End bp | 2569811 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644973568 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003131391 |
|---|
| Protein GI | 257053558 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGGA CCATCGCAGG CGTACTCGCA GTGCTGTTGG TCGTCGGTGG TGTGGCCGGT
GTGGCGCTGT CGCCCGCTGC CGGCCAGGCC GCTACCCACG AATCGACTGT CAACTGCTCG
TTCCCGATCA CCGTCACCGA TGCCAACGGG GCGAACGTGA CGGTGAGTGA GCGACCGGAA
CGAGTCGTCA CCCTTGCACC GAGTGCTTCC CAGGTCGTGT GGGAACTCGG TGCCCAAGAC
AGCGTTGTCG GGATGCCGGT CAACCAGTAC ACGAGCTACC TGAACGGATC GAGCGAGAAG
ACGAACGTCG TCACCGACAA CGGACAGCCC CAGATCGAGA CGATCATCGG ACTCGAACCC
GATCTGGTGC TTGCGCCGAA TATCATCAGC TCTGACGCGG TCGAACAACT CCGGGACGCG
GGCGTGACGG TCTATCGTTT CGAAAGTGCG AGTTCGATCG GTGACGTCGT CGAGAAGACG
CGACTCACCG GGCGACTGCT CGGCACCTAC GAGACCGCCA CCGACGTCAG TGCTCGGACG
CAGGCAGCCG TCGAGGCTTA CCGGAATGCG ACCACCGGGG CGGAACGACC GACAGTCTAC
TACGCCATGG GCGGTGGATT CACCGCCGGT CCCCAGACGT TCATCGGTGA CGTGATCGAT
GCTGCCGGCG CGGATAACGT TGCCAGTGCC GCAAACATCA GCACCTACGA TACGATCAGT
ACCGAAGTTG TCGTCGAGGA AAATCCCGAC TGGATCGTCG TCTCGGGGCA ATCGCCGATC
CCGTCCGATC CCGCGCTGTC GAACACCACG GCGATACAGG AAAACCAGAC TGTCCGCGTC
GACGCCAACT TCATCAGCCA ACCCGGGCCG CGGGTGACCC AGCCGCTACG GACGCTGGCG
ACGGCATTCC ATCCCGAAGC GGCGGCCGAC GTGACTGCGG ATCCGTCGAC GGTGTCGGCC
CCGGTCTGTG CGGCTGATGC GATGGAGCCG ACGACGACTG AGTCGGCGTC GGCAACGACG
ACCGATTCAT CGGCCGAGAC GACCGAGATG ACGACCGATT CAACGACCGA ATCGACGACG
GCCGAGACGG TCACGCTGGA AACTAATCAG ACGATGGACC AAGCCACCGA ACAGACCACG
ACCGCCACTG GCCCTGGGTT CGGGATCGTC GCGGCACTCA TCGCGCTGGT TGGCGCGGGA
ACGGTTACCC GGCGTCAGTA A
|
|---|
| Protein sequence | MSRTIAGVLA VLLVVGGVAG VALSPAAGQA ATHESTVNCS FPITVTDANG ANVTVSERPE
RVVTLAPSAS QVVWELGAQD SVVGMPVNQY TSYLNGSSEK TNVVTDNGQP QIETIIGLEP
DLVLAPNIIS SDAVEQLRDA GVTVYRFESA SSIGDVVEKT RLTGRLLGTY ETATDVSART
QAAVEAYRNA TTGAERPTVY YAMGGGFTAG PQTFIGDVID AAGADNVASA ANISTYDTIS
TEVVVEENPD WIVVSGQSPI PSDPALSNTT AIQENQTVRV DANFISQPGP RVTQPLRTLA
TAFHPEAAAD VTADPSTVSA PVCAADAMEP TTTESASATT TDSSAETTEM TTDSTTESTT
AETVTLETNQ TMDQATEQTT TATGPGFGIV AALIALVGAG TVTRRQ
|
|---|
| |