Gene Huta_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2340 
Symbol 
ID8384639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2379527 
End bp2380780 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content62% 
IMG OID644973413 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003131239 
Protein GI257053406 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones168 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATT CTGAGACCAC AGGAAAGCAG CGGATTTCAA TGGGCTTACC CGTGCGCACT 
CGGGAGGATT CGACAGTGAG CCAGCAAGCG TCTCGGCGGG CCTGGACCGT GGTGCTGTTC
GCCTTCGTCG CGATCGACGG GGCGATCATC CAGGCCCGGG GTGCGCTGGT CCCGGTTTTC
AAGGACGTCT TCCCGGTCAC CGAGAGCCAA TTGGGGCTGG TCACGCCGGT CGGCACTGTC
GGGTTCGTGC TCGCGATGCT CATCTTCGGG ACGGCGAGCG GCCGGATCGA CATCAAGCGC
TTTCTCGTTA TCAGCGTGGC CGCGACGATC GGCAGTGTCC TCCTTTTGGG GCTCTCGCCG
ACCTATCTCC TCTTGCTCGT GTTCTTCGGG ATCCGAAGTT TCTCGACGGG CATCTTCCGG
TCGCTCGATC GGTCTGTGCT GAGCCACCTC TATCCGAACT CACGGGCACG GGTCATGAGT
CTCCATACGA TGGTCTGGGC TATCGGCGCG ACGATCGGGC CGCTGGTAGT GACGGTCGTG
ATGTGGGAAT TCTCCTGGCG AGTGACGTAC CTCGTGCTTG CGATCGCCTT GGTTCCGATC
CTGGTGGCCC TCTGGCGACT CGACCGCCCC GAATCACTCG AGGAGGAACG ATCGCTCGAA
CTCGACGACG TGAAAGTCCT CCTCCGAGAG CCACCGATCT ACGGGATGGC GATCGCGCTG
GTCTTCGTCG GCAGCATGGA GAGCGTCTTC TTCAACTGGC TGCCCTATTA CGCGGAGGGA
CTGTTCAGCG AAAACGTCGC CAATCTCACG CTGTCGATCT ATCTGGCGGC GTACGTCCCC
GGCCGACTCA CCTTCAGCTA CCTGGCCGAG CGCTATCGGT TCACCGACGT ACTCGTCGGT
GTCGGGGTGG TCCTCGTCGT CACGATGTAC GCGGCACTTG TCCTCGCCTC CGGGCCCGGA
CTGCTTGCGC TCATCTTCGT GATCGGCTTT TTCATCTCTG GGTTGTTCCC GACACTCATC
TCGATGGGCA TCGAGTCCAA ACCCTCCTTT ACCGGCCCGG TGAACGTCGT CGCCAACGTC
TCGGCCCAGA CCGGCTTCTT TATCGCCCCG GCCACCGTCG GGGTGATCGC CGAGGCGACG
ACGATCGGGA CCGCAATGTT GCTCCAGATC GGGCTGGCGA TCGCCCTGGT CGTGATCGTC
ATCGGTCTCA AACTCGGCCC ACTCGCCGGC CAATCAGTAC CTGATCGGGG CTGA
 
Protein sequence
MQNSETTGKQ RISMGLPVRT REDSTVSQQA SRRAWTVVLF AFVAIDGAII QARGALVPVF 
KDVFPVTESQ LGLVTPVGTV GFVLAMLIFG TASGRIDIKR FLVISVAATI GSVLLLGLSP
TYLLLLVFFG IRSFSTGIFR SLDRSVLSHL YPNSRARVMS LHTMVWAIGA TIGPLVVTVV
MWEFSWRVTY LVLAIALVPI LVALWRLDRP ESLEEERSLE LDDVKVLLRE PPIYGMAIAL
VFVGSMESVF FNWLPYYAEG LFSENVANLT LSIYLAAYVP GRLTFSYLAE RYRFTDVLVG
VGVVLVVTMY AALVLASGPG LLALIFVIGF FISGLFPTLI SMGIESKPSF TGPVNVVANV
SAQTGFFIAP ATVGVIAEAT TIGTAMLLQI GLAIALVVIV IGLKLGPLAG QSVPDRG