Gene Huta_2312 details

Gene Information

• Locus tag: Huta_2312
• Symbol: rps5p
• ID: 8384610
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2351635
• End bp: 2352267
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644973385
• Product: 30S ribosomal protein S5P
• Protein accession: YP_003131212
• Protein GI: 257053379
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.19422
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACG GATGGGAACC ACGAACGCGG CTCGGCCGGC AGGTCGCCGA CGGCGAGATC 
GACTCGATGG GCGACGCGCT GAACGCCGGG CTGCCACTGA AGGAACCGGA GATCGTCGAC 
CAGCTCGTCC CCGGGCTCGA AGACGAAGTA CTGGACATCA ACATGGTCCA GCGCATGACC 
GACTCTGGCC GCCGGGTGAA GTTCCGGTGT GTCGTCGTCG TGGGCAACCG CGACGGCCTG 
GTCGGCTACG CCGAGGGGCG TGACGATCAG GTCGGCGGCG CGATCCAGAA GGCCATCGAG 
GTCGCCAAGC TCAACATGAT CGACATCTCC CGCGGGTGTG GCTCGTGGGA GTGTGGCTGC 
GGGCGACCCC ACACGGTCGC GCTCCGCACC ACGGGCAAGG CCGGCAGCGT CGAGGTCGAA 
CTCCAGCCCG CACCGCGCGG GCTCGGACTC GCCGGCGGAG AGACCGTCCG GCACGTCCTC 
GAACTCGCCG GGATCGAAGA CATCTGGACG CGATCGAGCG GAAACACGCG CACGACCGTC 
AACTTCGCGA AGGCGACGTT CAACGCCCTG CGGAGCACGG CCGAGGCGCG GGTACCCGAG 
CGGGCATTCG AGGAGCGCGA GGTGATCGAG TGA 

 

Protein sequence

MSDGWEPRTR LGRQVADGEI DSMGDALNAG LPLKEPEIVD QLVPGLEDEV LDINMVQRMT 
DSGRRVKFRC VVVVGNRDGL VGYAEGRDDQ VGGAIQKAIE VAKLNMIDIS RGCGSWECGC 
GRPHTVALRT TGKAGSVEVE LQPAPRGLGL AGGETVRHVL ELAGIEDIWT RSSGNTRTTV 
NFAKATFNAL RSTAEARVPE RAFEEREVIE