| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2275 |
|---|
| Symbol | |
|---|
| ID | 8384572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 2323665 |
|---|
| End bp | 2324846 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644973347 |
|---|
| Product | translation-associated GTPase |
|---|
| Protein accession | YP_003131175 |
|---|
| Protein GI | 257053342 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCGC TCGCACTTGC CGGCAAGCCA AACGCCGGCA AGTCGACGTT TTACACCGCA
GCGACGATGG CCGACGTGGA CGTCGCCAAC TACCCGTTCA CGACGATCGA CGCCAACCGC
GGCGTGAGTC ACGCCCGGAC ACAGTGTCCG TGTCTCGATC TCGACGAGCG GTGTGGTAAC
GATCGCTGTC ACGACGGCAA GCGATACGTC CCCGTCAAAC TGCTCGACGT CGCGGGCCTG
GTCCCTGGTG CTCACGAGGG ACGCGGGCTG GGCAACCAGT TCCTCGACGA GCTGACCGAC
GCCGACGCGA TCCTCCACGT CGTCGACGCC TCCGGGGCGA CCGACGAGGA GGGCGAACCG
GTCGAGATCG GCGAGCACGA CCCGGTCGAG GATCTGGATT TCATCGAGGA GGAGATGGAT
CTGTGGCTGG CCAGCATCAT CGAGCGCAAC TGGGAGACCG TCGAGCGTCG CTCCCGGTCG
CCCGATTTCG ACATCGACGA GGCGCTCTCG GAGTTTCTGA CGGGGGTCGG CGCGACGGAA
CTCGACGTGG CCCGGACGCT CCGCGAACTG GAGTATCCCG AGGATCCACT CGCCTGGACC
GACGAGCATC GCGAATCGCT GGCGAGTGAC ATCCGAGCGC GAACCAAGCC CATCATCGTC
ATCGCAAACA AGGCCGACGT CGCCCCACCC GAAAATATCC AGGCACTCAA AGAGCGAAAC
GAAGCGACGA TCCCGGTCAC CGCCGACGGC GAACTCGCCC TCCGGCGGGC CGTCGAAGCG
GACATCGTCG AATACGATCC CGGTGATCCT GACTTCGAGA TCACCGGCGA TATCAGCGAC
GACCAGGAAG CCGGCCTCGA ACGGATCCGC GACGTGATGG ACGACCACGG CGGGACGGGC
GTCCAGAAGG CGCTGGACAC GGCCGTCTAC GAAGTGCTCG ATCAACTAAC GGCCTATCCG
GTCCAGGACG AAACCCACTG GACCGACGGC CAGGGCAACG TCCTGCCCGA CGCACACCTC
CTGCCCGATG GATCGACACC GCGAGACCTG GCCTATGCAG TCCACTCGGA CATCGGTGAG
GGGTATCTCC ACGCCGTCGA CGCCCGCGAG AAACGCCGGA TCAGCGACGA CACCGAACTC
GATGAGGGCG ACGTGATCAA GATCGTATCG ACGGCGAAGT GA
|
|---|
| Protein sequence | MLSLALAGKP NAGKSTFYTA ATMADVDVAN YPFTTIDANR GVSHARTQCP CLDLDERCGN
DRCHDGKRYV PVKLLDVAGL VPGAHEGRGL GNQFLDELTD ADAILHVVDA SGATDEEGEP
VEIGEHDPVE DLDFIEEEMD LWLASIIERN WETVERRSRS PDFDIDEALS EFLTGVGATE
LDVARTLREL EYPEDPLAWT DEHRESLASD IRARTKPIIV IANKADVAPP ENIQALKERN
EATIPVTADG ELALRRAVEA DIVEYDPGDP DFEITGDISD DQEAGLERIR DVMDDHGGTG
VQKALDTAVY EVLDQLTAYP VQDETHWTDG QGNVLPDAHL LPDGSTPRDL AYAVHSDIGE
GYLHAVDARE KRRISDDTEL DEGDVIKIVS TAK
|
|---|
| |