Gene Huta_2207 details

Gene Information

• Locus tag: Huta_2207
• ID: 8384501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 2259153
• End bp: 2259722
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973276
• Product: DNA-directed RNA polymerase subunit E'
• Protein accession: YP_003131107
• Protein GI: 257053274
• COG category: [K] Transcription
• COG ID: [COG1095] DNA-directed RNA polymerase, subunit E'
• TIGRFAM ID: [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAAAC GGGTTCGATT GCGCGACACG GTCGAGGTAC CGCCCGAGCA TCTGGCAGAC 
GTGACGCCGG GGCTCGTGAA ACGACTGCTA CAGGAGAAAC TCGAAGGCCG CATGGACGAA 
GACGTCGGCA GCGTCGTGAG CGTGACGGAG GTCCACGACA TCGGCGAGGG GGCAGTCGTC 
CCCAACGAGC CCGGCGTCTA CTACGTGGCC GAGTTCGACG CCCTCACCTT CGATCCGCAG 
ATGCAGGAGG TCGTCGACGG TGAGGTCGTC GAGGTCGTCA ACTTCGGCGC GTTCGTCGGG 
ATCGGCCCTG TCGACGGACT CCTCCACGTC TCCCAGATCT CCGACGAATA CCTGGCATAC 
GACGGCGAGA ACCAGCAACT CGCCTCCCGG GACTCGAATC GGACGCTGAC CGTCGGGGAC 
TCGGTGCGCG CCCGGATCGT CACCAAGTCC ATCGACGAGC GCAACCCCCG GGACTCAAAG 
ATCGGCCTGA CGGCCAAACA GGTCGGGCTG GGCAAGCACG GCTGGCTCGA CGAGGAGCGC 
AAGGCGCGCG CCGAAGCGGG TGAGAACTGA 

 

Protein sequence

MYKRVRLRDT VEVPPEHLAD VTPGLVKRLL QEKLEGRMDE DVGSVVSVTE VHDIGEGAVV 
PNEPGVYYVA EFDALTFDPQ MQEVVDGEVV EVVNFGAFVG IGPVDGLLHV SQISDEYLAY 
DGENQQLASR DSNRTLTVGD SVRARIVTKS IDERNPRDSK IGLTAKQVGL GKHGWLDEER 
KARAEAGEN