Gene Huta_2178 details

Gene Information

• Locus tag: Huta_2178
• ID: 8384472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2229210
• End bp: 2229812
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644973247
• Product: Superoxide dismutase
• Protein accession: YP_003131078
• Protein GI: 257053245
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.799015
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACT ACGAGCTACC GCCGCTACCG TACGACTACG ACGCACTGGA ACCGCACATC 
TCCGAACAGG TACTGCGCTG GCATCACGAC ACCCACCATC AGGGTTACGT CAACGGCTGG 
AACGCCGCCG AGGAGACCCT CGCCGAGAAC CGCGAGGCCG GTGAGTTCGA CTCCTCGGCC 
GGGGCGATCC GCAACGTCAC GCACAACGGC TCCGGCCACG TCCTGCACGA CCTCTTCTGG 
CAGTCGATGA GCCCGGAGGG TGGCGACGAA CCCGCGGGCG ACCTCCGCGA GCGAATCGAG 
GAGGACTTCG GCTCCTATGA CGCCTGGAAG GGCGAGTTCG AGGCTGCCGC CAGCGGGGCC 
GGCGGCTGGG CGCTTTTGGT CTACGATTCG TTCAGCAACC AGCTTCGCAA CGTCGTCGTC 
GACAAACACG ACCAGGGCGC GCTCTGGGGC AGCCACCCCG TCCTGGCGCT GGACGTCTGG 
GAGCACTCCT ACTACCACGA CTACGGTCCA GCCCGCGGTG ACTTCGTCGC AAACTTCTTC 
GAGGTCGTCG ACTGGGAGGA ACCCGCCGCG CGCTTCGAGC AGGCCGTCGA ACTGTTCGAG 
TAG 

 

Protein sequence

MSDYELPPLP YDYDALEPHI SEQVLRWHHD THHQGYVNGW NAAEETLAEN REAGEFDSSA 
GAIRNVTHNG SGHVLHDLFW QSMSPEGGDE PAGDLRERIE EDFGSYDAWK GEFEAAASGA 
GGWALLVYDS FSNQLRNVVV DKHDQGALWG SHPVLALDVW EHSYYHDYGP ARGDFVANFF 
EVVDWEEPAA RFEQAVELFE