| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2129 |
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| Symbol | |
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| ID | 8384423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2167117 |
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| End bp | 2170083 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644973198 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003131029 |
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| Protein GI | 257053196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTG CGGACATTCC GGGGGTACCC GCGTGGTTGC CCGAGCACCT GCAGGCGGAG
GGCATCGAGG AGTTGTATCC ACCACAGGCC GAGGCCGTCG AAGGTGGCGT CACCGACGGG
GCGAACCTCG TCGCGAGCGT GCCCACGGCC AGCGGCAAGA CACTCATCGC CGAACTCGCG
ATGTTCTCGG CGATCACCGA CGGGGAAGGC GATGAGGCCG GCGACGACGA AGGTGTAGAC
CACGCGGCGG AAACTGACGG CACCGCGCTC TACATCGTGC CGCTCCGGGC GCTCGCCAGC
GAGAAACGCA CCGAGTTCGA ACAGTTTGAG GCCTACGGCC TGGAGGTCGG CGTCTCGACA
GGTAACTACG AGAGCGACGG CGGATGGCTC GGTGACAAGG ATGTCGTGGT CGCCACCAGC
GAGAAGGTCG ATTCCCTCGT GCGAAACGAT GCGCCATGGA TCGACGACCT CGATTGCGTC
GTGGCCGACG AGGTCCACCT CGTCGACGAC GGCGAGCGCG GCCCGACCCT GGAGGTCACG
CTCGCCAAAC TTCGAAAGCG CAATCCGGAT CTCCAGACGG TCGCGCTGTC GGCGACGATC
GGCAACGCCG ACGCGCTCGC CGAGTGGCTG GACGCCGAAC TCGTCGACTC GACCTGGCGG
CCCATCGACC TCAAAAAGGG CGTCCACTAC GGGCAGGCGT TGCAATTTGA AGACGGCAGC
CAGCAAGAAC TCCGAGTCCA CGATAATGAG AAGGCAACTG CTGCCATCCT CAGGGACACT
TTATCTAGTG AAATTCAGGA TCTAGCACAG GTACCCAAAA ATAAGAGAAA TCTGATAAAA
GAAACTCTTG ATGGAACTTT TGACCCCCAA GTGGAATATC AACAGTCAAT AAAGGAAGAG
ATACAAAATC TGTGTATCGA TCCTCTTCAA TATGATATTG GTGAAGAGTT TGGAATATTT
GGCATCGCGA TAACGCACGA TATTGGCTCT GCAGAAGATA TTGCTGTTCG ACTTTCGGAA
GATACGACGG CTTTCGTCTC ATCCTCTGAG AGAGACACAC TCAACGAGGT TGCAAAAGAA
GTCCAGGCCG CAGGCAATTC ACGCTCTGTA CAAAAGTTAT CTGAACTAAT TCCGACTGGG
GTTGGATTCT ATCACGGAAA ATTACCGGAA AAGTGTCGTC GTCGAGTCAA AGAATTAGCT
AACGACGGGT TGTTAAAATC TATAGTCTCG ACCACTTCGC TTGATCTTGA TAACGTTGAT
AACACCAACA CATTCCATGA GGGTGGCTCT TTGCTTGTAT TTGTCAACTC TCGGAAAAAC
GCCGAAGCCG CGGCTCGACG GCTCGCATCA ACGACCGATC CCCTCCTTTC CGGCGACGAA
CGCGACCGTC TCGCCGAGAT CGCGGCGGAG ATCCGCGATG TCAGCGACAC CGAGACCAGC
GACGATCTGG CCGACGCTGT CGAGGGTGGC GCGGCCTTCC ATCACGCCGG GCTCTCCCGG
GAACACCGCT CGCTCGTCGA GGAGGCGTTC CAGGAGCGTC TCGTCAAAGT GATTTCGGCG
ACCCCGACCC TGGCGGCGGG CGTCAACACC CCCTCCCGGC GGGTCGTCGT CCGGGACTGG
CGGCGCTACG ACGGGACGGC GGGCGGGATG CAGCCCCTCT CGGTGCTGGA GGTCCATCAG
ATGATGGGGC GGGCGGGCCG ACCCGGGCTG GACCCCTACG GCGAGGCGCT GCTGCTGGCG
AGCAGCCACG ACGAACTCGA CGAACTGTTC GAGCGCTACG TCTGGGCCGA CCCCGAACCG
GTCCAGTCGA AACTCGCCGC CGAACCCGCG CTCCGGACGC ACATCCTCTC GACGGTCGCC
TCCGGGTTCG CCAACTCCCG GGCGGGCTTG CTCGACTTTT TGGAGGCCAC GCTCTATGCC
AGCCAGACGA CCGAGGGCGG CCGCCTGGAG ACGGTCGTCG ACGAGGTGAT CGCCTACCTC
GAGGCCAACG ACTTCCTCAC GCGCGAAGAC GATCCGGACG GCACCCTTCG GGCCACATCC
ATCGGCCAGA CTGTCTCGCG ACTCTACCTC GACCCGATGA GCGCGGCGGA GATGCTCGAC
GGCTTGCGCG AGTTCGAGCG GACGGCCGGG GAGCGATCGA CTCGATCACC CCACGACGGG
GAGCGGGACG ACGAGCCGCC GGGCTTCGAG CCGGCCAGCG AACTGGTGTC GGACGCGGGC
GACGACATCG GTGAGTCCGA CGACACTGAC GACACCCCCC AGCCGACCGC GATGGGGCTG
TACCACCTCG TCTCCCGGAC GCCGGACATG TACGAACTCT ACCTCCGGTC GGGTGACGAG
GAGGAGTACT CCATGGAAGC CTACGAGCGC GAAGCGGAGT TCCTCGGCGC GATGCCCAGC
GAGTTCGAGG AGGGTCGCTT CGAGGACTGG CTGTCGGCGC TGAAGACCGC CCGACTCCTC
GAAGACTGGG CCGACGAGGT CGAGGAGGGG ACGATCACCG AGCGCTACGG CGTCGGGCCG
GGCGACATCC GCGGGAAGGT CGAGACGGCG TCCTGGCTGC TCAACGCCGC CGAGCGACTC
GCCGGTGAAG TTGGCCTGGA CGTGACGCCG GCGATCAGGG AGGCTCGCGT GCGCGTCGAA
CACGGCGTCC GGGCGGAACT GGTCGACCTC GCGGGCGTCC GCGGCGTCGG TCGGAAACGT
GCCCGCCGAC TGTTCGCCGC CGGCATCGAG TCTCGCGAGG ACCTCCGAGA GGCCGACAAG
GCGGTCGTGT TAGGGGCGCT TCGTGGCCGG GAGAAGACCG CTGAAAACAT CCTGACGAAC
GCCGGCCATC GCGACCCCTC GATGGATGGG GTAACGCCGG CGGCGGGGAG TGACGAACTC
ACAGCCGCGA ACGGCGCTGG ATCCGGAGAC CGGGACGGTG CCGAAGACGA GCAACCGGCC
GATCAGTCCA GCCTGGGTGA TTTCTGA
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| Protein sequence | MDVADIPGVP AWLPEHLQAE GIEELYPPQA EAVEGGVTDG ANLVASVPTA SGKTLIAELA
MFSAITDGEG DEAGDDEGVD HAAETDGTAL YIVPLRALAS EKRTEFEQFE AYGLEVGVST
GNYESDGGWL GDKDVVVATS EKVDSLVRND APWIDDLDCV VADEVHLVDD GERGPTLEVT
LAKLRKRNPD LQTVALSATI GNADALAEWL DAELVDSTWR PIDLKKGVHY GQALQFEDGS
QQELRVHDNE KATAAILRDT LSSEIQDLAQ VPKNKRNLIK ETLDGTFDPQ VEYQQSIKEE
IQNLCIDPLQ YDIGEEFGIF GIAITHDIGS AEDIAVRLSE DTTAFVSSSE RDTLNEVAKE
VQAAGNSRSV QKLSELIPTG VGFYHGKLPE KCRRRVKELA NDGLLKSIVS TTSLDLDNVD
NTNTFHEGGS LLVFVNSRKN AEAAARRLAS TTDPLLSGDE RDRLAEIAAE IRDVSDTETS
DDLADAVEGG AAFHHAGLSR EHRSLVEEAF QERLVKVISA TPTLAAGVNT PSRRVVVRDW
RRYDGTAGGM QPLSVLEVHQ MMGRAGRPGL DPYGEALLLA SSHDELDELF ERYVWADPEP
VQSKLAAEPA LRTHILSTVA SGFANSRAGL LDFLEATLYA SQTTEGGRLE TVVDEVIAYL
EANDFLTRED DPDGTLRATS IGQTVSRLYL DPMSAAEMLD GLREFERTAG ERSTRSPHDG
ERDDEPPGFE PASELVSDAG DDIGESDDTD DTPQPTAMGL YHLVSRTPDM YELYLRSGDE
EEYSMEAYER EAEFLGAMPS EFEEGRFEDW LSALKTARLL EDWADEVEEG TITERYGVGP
GDIRGKVETA SWLLNAAERL AGEVGLDVTP AIREARVRVE HGVRAELVDL AGVRGVGRKR
ARRLFAAGIE SREDLREADK AVVLGALRGR EKTAENILTN AGHRDPSMDG VTPAAGSDEL
TAANGAGSGD RDGAEDEQPA DQSSLGDF
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