| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2002 |
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| Symbol | truA |
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| ID | 8384296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2024052 |
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| End bp | 2024879 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644973072 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003130903 |
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| Protein GI | 257053070 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.402759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACG TTTCGAGACG GGCGTTTCGA ATCGCCTACG ACGGCCGCCC GTTCCACGGG
TTCCAGCGCC AGCCCGACGT GGCGACTGTT TCTGACGCGA TCCTCGACGC GCTCCGGGAG
CTGGATGTCC TCGAAGACGG TGACAACGTC CCGCCCGGCT ATGCCGCCGC CGGACGCACG
GACGCCGGCG TCTCGGCACT CGCCCAGACC GTCGCCTTTG ATTGCCCGGA CTGGCTCTCG
CCCGCGGCGC TCAATAGCGA ACTCCCGGCC GACGTCCGGG CCTGGGCGAG CGCCGACGTG
CCCGCCGAGT TTCACGCGAC TCACGACGCC GTCGCCCGCG AGTACACGTA TCACCTTCAC
GCCCCGGACG CATCGGTGTC GCGGGCAGGG GATGCCCTCG ACGCCCTCGC CGGCGAGCAC
GATTTTCACA ACTTCACGCC CGACGACACC GGGACCGTGC GCGATCTCAC TGGCGAGGCA
CGGAGTGAGG GTGACTTTCT GGTCGTGACT CTCCGCGCCG ACGGGTTCCC CCGACAGTTC
GTCCGGCGGG CCGTCACCGT CATCGACGCC CTCGCGAGTG GTGTGGCCGA ACTCGACCGG
ATCGAGCAAC TGCTCGGGGA CGACCCGGTC GAGGGGCCCG CGGGCGTCGC GCCGGCTGCC
CCCGAAGCGC TGGTCCTGAC TGCTGTCGAG TACCCGGGTC TCTCCTTCGA ACGCGACGAG
TCAGCACTCG CGAGTGCGCG TGCAATCTTC GAAACGAAAG CGATCGATCA CCGGACGAAC
GCCCGGGTCG CCTCGAGGAT CGCCGACGGG ATCGATCAGG AAGAGTGA
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| Protein sequence | MTDVSRRAFR IAYDGRPFHG FQRQPDVATV SDAILDALRE LDVLEDGDNV PPGYAAAGRT
DAGVSALAQT VAFDCPDWLS PAALNSELPA DVRAWASADV PAEFHATHDA VAREYTYHLH
APDASVSRAG DALDALAGEH DFHNFTPDDT GTVRDLTGEA RSEGDFLVVT LRADGFPRQF
VRRAVTVIDA LASGVAELDR IEQLLGDDPV EGPAGVAPAA PEALVLTAVE YPGLSFERDE
SALASARAIF ETKAIDHRTN ARVASRIADG IDQEE
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