| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1952 |
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| Symbol | |
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| ID | 8384245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1975558 |
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| End bp | 1977657 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644973021 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003130853 |
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| Protein GI | 257053020 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1202] Superfamily II helicase, archaea-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCCAGC AGGTTACGCA GGTCGATACG CTGTTCCTCC ACGAGGACGG CGAGGACTTT
CAGGTGGTCG TCCAGCGCGA CGGCGAGCGC GTCCTCGACG GTCGCCTGGA GGTCAAAGAG
ACCGAAGCAG GTCCACGCCC GGCCCGACTC CGGATCAAGC GGGGCAGCCA GGAGGACCTC
CGCAGCCCCG ACCAGTTCGT GGAACTCGCC CGCCGAGCGG GGCGGATTCG CGTCTCCGAG
CAGACCTCCG CCCGCGGTCG CCGCGTCGTC CGCGAGCTAC TCGACGCCTA TCAACTGGAG
GCGAAGGTCG TCCGGACCTG CCGCTTTTGC GCGTCGGCTG GCAAATACTC GCCGATCACG
AGCGAGACGG CGATCGACGC CGACGGCGAG GACATCTGCC CGTCGTGTGC GATCACGGAA
CTCGAACGCG AACTCGCCTA CCACGGCGAC GTGACCGGGA CGGCCCGTGA TCGGCTGGAA
GAACTCTTAT TGGATGTCCA GGACCTCGAA CGCATCGTCA ATCTCCTCTC GGGCGAACTC
GACCCGGAAC TCACGAAGTT CGACGAGATC AGCGCCACGG TCGAGGACAT CGATCTGGTG
CCGACGGACT CCCTTTCGTT GCACCCGGGA ATGCAGCAGA AACTGGAGGG GCAGTTCGAC
GAACTCCTGC CCGTCCAGAG CCTCGCCGTC GAGAACGGCG TCACCGACGG GCAGGACCAG
CTCGTGGTCT CGGCGACCGC AACCGGGAAA ACGCTGATCG GCGAGATGGC CGGTATCGAT
CGGGTACTCA ACGGGAAAGG CAAGATGCTG TTTCTGGTCC CGCTGGTGGC ACTGGCCAAC
CAGAAATACC AGGACTTCCA GGCTGAGTAC GGCGATATCG CCGACGTGAG CCTCCGGGTC
GGATCGAGCC GAATCCGCGG AGACGGCGGT GGGTTCGATC CCAGCGCCGA CATCATCGTC
GGGACCTACG AAGGGATCGA CCACGCGCTG CGGGTCGGTC ACGACCTCGG GGACATCGGG
ACCGTCGTCA TCGACGAGGT CCACACCCTC GGCGAGGGCG AGCGGGGCCA CCGGCTGGAC
GGGCTCATCT CGCGGCTGAA ATACTACTGC GAATCGGGTG GGAAGACGGC AGCCCGCTCG
AATCGCTCCG GCGGACGGGG CGGGTCAGCT TCGAGTTCTC AGTCGGGCGA CACCCAGTGG
ATCTACCTTT CGGCGACCGT GGGCAACCCG GGGTCGCTCG CGGACTCGCT ATCGGCCAAG
CTCATCGAGT TCGAGGAGCG CCCGGTCCCG ATCGAGCGTC ACGTCACCTT CGCCGACGAC
TACGAGAAGG TCGACATCGA GAACAAGCTC GCCAAACGGG CCTTCGACAC GAAATCCTCG
AAGGGGTATC GCGGCCAGAC GATCATCTTC ACCAACTCCC GGCGGCGGTG TCACGAGATC
TCCCGCCGGC TCGAGTACTC CTCAGCCCCC TACCACGCCG GCCTGGACAA CAAGCGCCGC
GGTGAAGTCG AGTCGCTGTT CGCCGACCAG GAACTGGCGG CGGTCGTGAC CACGGCAGCG
CTGGCAGCGG GCGTGGACTT CCCGGCCTCC CAGGTCATCT TCGATTCGCT GGCGATGGGC
ATCGAGTGGC TCACGGTCCA GGAGTTCTCA CAGATGCTCG GGCGGGCTGG CCGGCCCGAT
TACCACGACA AGGGGACGGT GTATCTGCTG GTCGAACCCG ATGGCGTCTA TCACAACAGC
CAGGAGATGA CCGAGGACGA GGTCGCGTTC AAGCTGCTGA AAGGCGAGAT GGAACCGGTC
ACGAATCGCT ACGACGAGAG CGCGGCCGTC GAGGAGACGC TGGCGAACAT CGTGGTCGGC
GGGAGTGCTG CCAAGCGCCT CAACGACCGG ATGCTCGGGG AAGTGCCGAC CAAGCACGCC
ATCGGCAAGT TGCTGGAGTA CGAGTTCATC GACGGACTGG AACCGACGCC GCTGGGCCGG
GCCGTCACAC GGCACTTCCT CTCGCCCGAC CGGGCGTTCC TGTTGCTCGA CGGGATTCGC
AAGGGAAGGG ATCCGTTCGA CATCGTCGCC GAGGTCGAGT TCGCCGACGA GGAGTTGTAG
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| Protein sequence | MSQQVTQVDT LFLHEDGEDF QVVVQRDGER VLDGRLEVKE TEAGPRPARL RIKRGSQEDL
RSPDQFVELA RRAGRIRVSE QTSARGRRVV RELLDAYQLE AKVVRTCRFC ASAGKYSPIT
SETAIDADGE DICPSCAITE LERELAYHGD VTGTARDRLE ELLLDVQDLE RIVNLLSGEL
DPELTKFDEI SATVEDIDLV PTDSLSLHPG MQQKLEGQFD ELLPVQSLAV ENGVTDGQDQ
LVVSATATGK TLIGEMAGID RVLNGKGKML FLVPLVALAN QKYQDFQAEY GDIADVSLRV
GSSRIRGDGG GFDPSADIIV GTYEGIDHAL RVGHDLGDIG TVVIDEVHTL GEGERGHRLD
GLISRLKYYC ESGGKTAARS NRSGGRGGSA SSSQSGDTQW IYLSATVGNP GSLADSLSAK
LIEFEERPVP IERHVTFADD YEKVDIENKL AKRAFDTKSS KGYRGQTIIF TNSRRRCHEI
SRRLEYSSAP YHAGLDNKRR GEVESLFADQ ELAAVVTTAA LAAGVDFPAS QVIFDSLAMG
IEWLTVQEFS QMLGRAGRPD YHDKGTVYLL VEPDGVYHNS QEMTEDEVAF KLLKGEMEPV
TNRYDESAAV EETLANIVVG GSAAKRLNDR MLGEVPTKHA IGKLLEYEFI DGLEPTPLGR
AVTRHFLSPD RAFLLLDGIR KGRDPFDIVA EVEFADEEL
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