| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1920 |
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| Symbol | |
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| ID | 8384211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1940774 |
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| End bp | 1943689 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644972988 |
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| Product | helicase domain protein |
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| Protein accession | YP_003130822 |
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| Protein GI | 257052989 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA CGACATTCTC TTCCGGCCAA CAAGTGATTC TCAACGGCAC GTCCGCGGAG
GTCATCCAGA CGCGGACAGT TGGTGACATC GAGTATCTTC GAGCATACAT CGACGGCGAG
GGCGTCAAGA CGGTCTGTCT GGACGACGTC GATATCCAGC CACACCAAAC CGGGCTGGAG
ACCCTCTCCG GGCAGCAACT CGATGATCTT CATCCGGATC ACGAGGCCGT ATCTGCCCAG
TGGTTCGACC TCCACACGCA GGCGACGAAG CTGAAGCTCG CCCACGAGCA GGGACAGTTG
CTGAGCATTT CCAACTCGCT CGTCCGGCTG GAACCCTACC AGCTGGCGTG CGTCAATTGG
GTGATGCAGA AACTCCGACA GCGTGCGCTC ATCGGGGACG ACGTCGGTCT CGGGAAGACC
ATCGAGGCGG GGCTCATCCT CAAAGAATTG AGTGCCCGAA ACCGGGCCGA CCGCGTCCTC
TTCGTCGTCC CTGCCCACCT CCAGAAGAAG TGGATCCGGG ATATGGATCG CTTCTTCGAC
GTGGATCTCA CCGTCGCTGA CCGGGCGTGG GTCGAAGGCG AGCGTCGGCG TCTCGGAGAG
GAGGCCAATA TCTGGAATCA AGACCAGCAG CAACTCGTCA CCAGTATGGC CTTCCTGCGG
CAAGAGGAGT TCCGGTCGGC GCTCCGAGAC GCGTTCTGGG ATGTCGTCGT GGTCGACGAG
GCCCACAAGG CCGCGAAGCG GGGCGACTCC CCGAGCAAGA CGGCGAACAT GGTCGAGACT
GTTGCGGGCA ACTCCGACTC ACTCCTCCTC CTCAGTGCGA CGCCTCACGA CGGGAAGGGA
GAGGCATTCC GGTCGCTCGT CGAGTACATC GACCCCTTCC TCGTCGCCGA GAACCGCGAG
CTCTCGCAGG AGACAGTCGA CCGTGTGATG ATCCGACGCG GCAAGACGGA CATCTACGAC
GACGACGGCG AGCGCATCTT CCCCGACCGG GAGGTCAACT CTGTCTCCGT CTCGATGACC
CACGACGAAC GGCAGTTCTA CCGCGCCGTC ACGGACTACG TCAAGAACGT CTACAATCGC
TCTGAGAAGC TGAACGAGCC CGCGGTCGGG TTCGCGATGG CGCTCATGCA GAAGCGGCTG
GTCAGCAGCG TCGGCGCGAT TCACGCCACG CTCCGCCGGC GGCTGAACGA TTTGCTCGAT
GAACAGACGG CGACGGACGA ACTCTCCGAG GAGGCCGAGG CCTACCTCGA CGGCGAGGAT
CTGGACGAGG ACGACAAGCA GCGAGCGGAA GACGAGATTG CCGGGCTGAC CGTCGCCAGC
AACGATGAAC AACTCCAAGA GGAGATCGAC ACGCTCCGCG ATCTCGTCTC ACTCGCCGAA
GACCTGCCCG TCGACTCGAA GGCCCAGAAG GTACGGCGGT TCATCAGCCA ACTCCTCGAA
GAGCAACCAG ACGAGAAGCT CCTGCTGTTC ACCGAGTACC GGGATACGCT CGACTACCTC
CTCGACTTCG TACAGGACGA GCCGTGGGCC GAAGAGATTC TGGTCATCCA CGGTGACGTC
GACAAAGAGG AGCGGGCCCG CATCGAAGAC GAGTTCAATC ACGGCCAGTC GCGACTGCTG
TTCGCGACCG ACGCGGCGAG CGAGGGGATC GACCTCCAGC ATAGCTGCCA CATTATGGCG
AACTACGAGT TGCCGTGGAA TCCCAACCGG CTCGAACAGC GCATCGGCCG GATCCACCGC
TACGGGCAGG ACAGGGAGGT CAAGGTCTGG AACTTCCTCT TTGATGACAC TCGTGAGAGT
GAAATCTTCG AGATGCTCCA GACCAAAGTC GAAGAGATTC GCTCGAAGCT CGGCAACACG
GCGGACGTGC TCGGAATCCT CGACGACATC GACGTGGACT CGCTCATTAT GGAGTCCATC
CAGAACGACG AGCCGCCGAG CGCAACCAAG GAGGAACTCG AGGACCTGAT CGAGGAGCGC
CAGCGCACGC TCGAAGAGTG GTACGAACGG AGTCTCGTCG ACACCAGCAC GTTCGACGCG
GAGAGCCGCC GGCAGATACA GGAGGTCGTC GACGAGTCCG AAGACGTCTA CGGGAGTGCC
GGTGACATTC GGGAGTTCTT CGAGCAGGCA GTCGAGGCCT TCGGCGGCGA GTTCGAGAAG
CGCGGCACCA ATCTCTATCA GGCCGAATTA CCCGAGGACA TCCGACCCCC GGATGAGGAT
GCGACCTTCG GCCCGTTCAC GTTCGACCGC GAATTTGCGA TGGAGCACGA GGAAATCACG
TTCGTAGCGC CCGACACGGA CGTCCTCCAG CGACTCATGG CACGCGTGCT GGAGTTCGAT
CGGGGAGATG TCGGCCTCAA ACTCCTCCCG TTCGTCGACA CGCCGGGAGT TACCTACAAT
TATCGCGTAG CGTTCGAGGA TGGCACCGGA GAGGCAATCC GGGAGGAGAC AATCCCCGTC
TTCGTCGACG CGGAGCAACG GGATGCCCAA CAAGGGCTCG GTGAGCGCGT CGTCGAGGGC
GAGACGGTGT CTGCGAAACC AGGGGTGGAT GACATCCGGA CAGTAGTGGA CGCCGAAGAC
GAACTTCGTG AAGCCGCCGA CCGCTATGTG AGTGCTCGGG TGAACGAGAT CAAGTCCGAC
CTCAGTTCCA AACGCCACGA AGAGACTGCC CGGGAACTCG AAAACCTCAA CGAGTACGCA
CAGTCCGAAC GCGAGCGCAT CGAGTCCTTT ATCGAGGAGT ACGAACGCAA GTCCGAGGCC
GGCTCGGATA TGGACATCGC GATCCGGGGC CAGCGTGAGC GTCTCGAAAA ACTCGAAGAG
CGAATCGAGA CGCGTCGCCA AGAGCTGAAA CGTCGGGAGC AGGTCATCTC GCTGGCGCCC
GAGGTCGAGA ACTACTGTTT GACACTACCA CTCTGA
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| Protein sequence | MTDTTFSSGQ QVILNGTSAE VIQTRTVGDI EYLRAYIDGE GVKTVCLDDV DIQPHQTGLE
TLSGQQLDDL HPDHEAVSAQ WFDLHTQATK LKLAHEQGQL LSISNSLVRL EPYQLACVNW
VMQKLRQRAL IGDDVGLGKT IEAGLILKEL SARNRADRVL FVVPAHLQKK WIRDMDRFFD
VDLTVADRAW VEGERRRLGE EANIWNQDQQ QLVTSMAFLR QEEFRSALRD AFWDVVVVDE
AHKAAKRGDS PSKTANMVET VAGNSDSLLL LSATPHDGKG EAFRSLVEYI DPFLVAENRE
LSQETVDRVM IRRGKTDIYD DDGERIFPDR EVNSVSVSMT HDERQFYRAV TDYVKNVYNR
SEKLNEPAVG FAMALMQKRL VSSVGAIHAT LRRRLNDLLD EQTATDELSE EAEAYLDGED
LDEDDKQRAE DEIAGLTVAS NDEQLQEEID TLRDLVSLAE DLPVDSKAQK VRRFISQLLE
EQPDEKLLLF TEYRDTLDYL LDFVQDEPWA EEILVIHGDV DKEERARIED EFNHGQSRLL
FATDAASEGI DLQHSCHIMA NYELPWNPNR LEQRIGRIHR YGQDREVKVW NFLFDDTRES
EIFEMLQTKV EEIRSKLGNT ADVLGILDDI DVDSLIMESI QNDEPPSATK EELEDLIEER
QRTLEEWYER SLVDTSTFDA ESRRQIQEVV DESEDVYGSA GDIREFFEQA VEAFGGEFEK
RGTNLYQAEL PEDIRPPDED ATFGPFTFDR EFAMEHEEIT FVAPDTDVLQ RLMARVLEFD
RGDVGLKLLP FVDTPGVTYN YRVAFEDGTG EAIREETIPV FVDAEQRDAQ QGLGERVVEG
ETVSAKPGVD DIRTVVDAED ELREAADRYV SARVNEIKSD LSSKRHEETA RELENLNEYA
QSERERIESF IEEYERKSEA GSDMDIAIRG QRERLEKLEE RIETRRQELK RREQVISLAP
EVENYCLTLP L
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