| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1880 |
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| Symbol | |
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| ID | 8384171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1885223 |
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| End bp | 1887181 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644972949 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003130783 |
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| Protein GI | 257052950 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGAGA GTCTCCGCCG GTTCGCGGTC GTGATCGGCC TCGCGTCGCT GGCCGGCGGG
AGCGTGGCAG TCCTAACGGC AGGGGCGGGC GGCACCTCGA GCCTGACGGC CGTCCTGTAC
GGGGGTGGCG GCGTGATCGC CGGCGTGATG GCGTTGCTGG TCTACCGGGA CTGGCGGACA
TCGAGTCGCA TCGAGCCCCC AGCGGTCGAA CGGACGCCCA CGCCGCCGAC ACCCGGAACC
GAATTCGACC GGACGCTGGG ACAGTTTGAC GGGAGTGGAA CCGGATACCT CCCGGATCGC
GCCGACATCC ACGATCGGCT TCGCGAACTC GCGGCCAGGA TTCTCGCCCG AAAGCGCGGG
ACGACACCGG AGGCCGCACT GGCCGCGATC GATGCCGGCG ACTGGCCGCG TGAGGAGGCG
AGTTCCGTGT TCCTCCGGAA CGCCGACGCG TCGGTCCCCG AGTCGCTGTC CGAACGCGCT
CGTGGCCTAT TCAGCGACGA CCCCTCGGAC TTCCAGCGGC TGGTCAGGCG GACGGTCGCG
ACACTCGAAG GCGAGTCCGA CCTCGTCGAT GAGGCGGGCG AAGGACGGCT CGTCCTCGAC
GACGACCGGC GATCCGAGGA GACCCACTCG ACGAGCGATC TCGCGGCGGA GATGGTCGGC
GGAAGCCAGG TATACGACGG CGTCACCAGC GCGCGCTTCC GGCCGCTGGT CCCGCTCGGC
GTCGCGTTCG TCGGCCTCGG CCTGTTCGTC CAGAACGCCG GGATCATCCT GGCCGGGACC
GTCCCGATCG GCGTCCTGGC GTTCGCCCGG TTCGTGACGC CGCCGGACGC CACGCTGACC
GTCGAGCGGA CGCTCGATCC CCGCCATCCC GATCCCGGAG ACGAGGTCAC GGTGACGACG
ACGGTTCGCA AGGACGGCGA CCGGACGCTG CCCGATCTCC GGGTCGTCGA CGGCGTCCCG
GAAGGACTCT CAGTGGTCGA GGGATCACCG CGGCGTGGGA CGGCACTTCG GCCCGGCGAG
GCAACGACCG TCGAGTACAC AGTGACTGCC CGCCGAGGGA CACACGAGTT CGGTCCTGTC
TACGCGATCG TCCGGGACTA TGCGGGCCGG TCGGCACGCA CGCAACTCGT TGAGGCCGTC
GAAGACGCCG ACACGTTGCT GTACTGTATT CCGGTGCTAC AGGCGACACC GGTGCAGGTC
CCACTGTTCG AACACGCAAG CGAGTCACTC GGCCGGATCC CCGCCGAGGG CGGGGACGGC
GTGGCGTTCT ACGCGACCCG GGAGTATCGA TCGGGCGACC CGACGAATCG CATCGACTGG
AAACGCCTGG CGCGGTCGCC GAGCGAGGAA CTCACGACGA TCGAGTTCCG GGAGGAACAC
GCCGCGTCGG TCGCCATCGC CATCGAGACC GCCGGATCGT CGTATACGGC ACCCGCGCCG
GACGAGCCGA CAGCACTCGA ACGGTCGATC GCGGCCGCTC GACGGCTATG TGGGTCGTTG
TTGGGGACCG GCGACCGGGT CGGGATCGCG GCACTCGGAC CGACGCCGGT GTGGATCGCG
CCCGGGACCG GGTACGACCA CCGCGAACGC GTCGAGCGCG TGCTGGCGAC CGACGACGCG
TTCCCGGCGA CGACACCCGA CAGCGATACG TTCAGCCCGC GCTGGGTCCG GGAGTTCCAC
CGCCGGTTCC CCGAGGAGAC CCAGGTCGTG CTGGTTTCGG CACTCACGGA CCCCACCTAC
CACTTCGTGA TCCATCGACT CCGCGCGTAC GGCCATCCGG TCACGGTGCT GAGTCCGGAC
GTGACGACGG GCGAAACCGT CGGCGAACGA CTCGTCCGCC TCGAACGGCG CCACCGGATC
GAGGCGTTAC GGGAGGCCGG CGTCCGGGTC ATCGACTGGG CAGACGAGGA AGAACTGGGC
GTTGCACTCA CGCGGGCCGG ATCGAGGTGG TCGGCATGA
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| Protein sequence | MNESLRRFAV VIGLASLAGG SVAVLTAGAG GTSSLTAVLY GGGGVIAGVM ALLVYRDWRT
SSRIEPPAVE RTPTPPTPGT EFDRTLGQFD GSGTGYLPDR ADIHDRLREL AARILARKRG
TTPEAALAAI DAGDWPREEA SSVFLRNADA SVPESLSERA RGLFSDDPSD FQRLVRRTVA
TLEGESDLVD EAGEGRLVLD DDRRSEETHS TSDLAAEMVG GSQVYDGVTS ARFRPLVPLG
VAFVGLGLFV QNAGIILAGT VPIGVLAFAR FVTPPDATLT VERTLDPRHP DPGDEVTVTT
TVRKDGDRTL PDLRVVDGVP EGLSVVEGSP RRGTALRPGE ATTVEYTVTA RRGTHEFGPV
YAIVRDYAGR SARTQLVEAV EDADTLLYCI PVLQATPVQV PLFEHASESL GRIPAEGGDG
VAFYATREYR SGDPTNRIDW KRLARSPSEE LTTIEFREEH AASVAIAIET AGSSYTAPAP
DEPTALERSI AAARRLCGSL LGTGDRVGIA ALGPTPVWIA PGTGYDHRER VERVLATDDA
FPATTPDSDT FSPRWVREFH RRFPEETQVV LVSALTDPTY HFVIHRLRAY GHPVTVLSPD
VTTGETVGER LVRLERRHRI EALREAGVRV IDWADEEELG VALTRAGSRW SA
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