Gene Huta_1865 details

Gene Information

• Locus tag: Huta_1865
• ID: 8384156
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1867992
• End bp: 1869914
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644972934
• Product: hypothetical protein
• Protein accession: YP_003130768
• Protein GI: 257052935
• COG category: [S] Function unknown
• COG ID: [COG2512] Uncharacterized membrane-associated protein/domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGATC TGGCCGAGAC TGCCGTTGTC GTTTGCCTTC TCCTGTCTAG CGTGGCGTTT 
ACCGGTGTTC ACGCCGCACC TGCTGGAGTG ACAGTCGAGG ACTTCGCGTA CTCAGGGCCC 
GGAAGCGTTC CACTCGAGGA CGGGTTGTTC CTGTGGCAAT CCTCGTCCCA CGAATTCACG 
GTGACGGTCT CGACGACGGT GACCGTCGAG GCCGACGTGT GTCTGGTTGC CTCGTTGTCC 
GGGGTTGCTG ACCGGCGGAA CCTGACCTGC AAAGCAGTAT CGTTACGGCG CGGCGTCACC 
GAACGGACGT CGTTATCGGT CAGTTCCTGG CCCGTCGACG TACACGGGGT GCAGTCGGTT 
GGCGTCGTCT TCAGCACCGA AAACGGGTCG ACGATATCGT CCACTTCGTC CGTGACGGTT 
ACCGTGTTGC AGGCGAACGC GTCGCTCGAC AATGACAGCC TGACCGACGA GCGAGAGGTC 
GCCCTCGGGA CCGATCCGAC CGTCGCGGAC ACGGACGGCG ACGGACTCGA CGACGGACGG 
GAGGTCGAAA TCCACGATAC CGCCCCCACG AACCCGGATA CAGACGGTGA CGGGCTGGTT 
GACGGTTCAG AGGTGACCGT CTACGGCACT GATCCCACCG ATCCCGATAC TGACGACGAC 
GGATTGGCCG ACGTGGACGA ACTGCTGGCG GACACGAGTC CGACGACCCC CGACACCGAC 
GGTGACGGAC TGACAGACGG CATGGAACTC GACACGTACG GGACCGATCC GACCGTCGCG 
GACACGGACG GCGACGGCCT CGACGACGAT CTCGAATGCG CCGAATACCT GACGGACCCG 
ACAAACTCGG ACTCCGACGA CGACGGCCTC GGGGATGCAC TCGAGATCCG CACGTACGAC 
ACCGACCCGA GAGGGGCCGA CACGGACGGC GACGGTCTCG ACGACGGCGT CGAAGTCGGT 
GCGTACGGCA CTGACCCGAC TGTAGCCGAC ACGGACGGCG ACGGCCTCGA TGACGGTGCG 
GAAATCAACC GTTTCGGGAC CGACCCGACC GTCGCGGACA CGGACGACGA CGGCCTCGAC 
GACGGTGCGG AAGTCACTCG TTTCAACACT GACCCCACGA GTGCCGACAC GGAGGGGGAT 
GGGCTCGACG ACGGTGCGGA AGTCAACCGT TTCGGCACCG ACCCAACGAG CGCTGATACG 
GACGGCGACG GCGAGGGTGA TGCCGCCGAG GTGTCTACCG GCATCTTCGG CCTGTCGTGG 
GTACCGGTCG AGGGCCTGCT GGTTGTCGGG CTGACGCTCG CCGGTGGGAT TCTGGTACTG 
TCCGCCCGGT CTTCGTTCGC CATCCCCTTC GATCATCGAC GAACCGATAC GTCCCCGGAA 
GACGACAGTC CCGATCACAC GAAACAGGGG CTGGATCCGG GTGGATCTCA CGCGAGCGAT 
AGAGACGTGG ATGCATCCTC GGAGAGAGAT CTGGACGCGA GTGCGGATCC CCTGGAGGAG 
GCCCCAGGGG GTGCGGATCC ATCGAAGGAC GAGACGGAGG CGGGTGATGG GCTGGCAGAA 
ACCGACACGG ACGATGAGAG TGCTCCGGCG ATGGAGGGTC GCGAAGACGC CACGCGGGGG 
GATTCAACAA CTGGGGCGGA CAGTGCTGGC CCGGTCGAGG AACACGCCGA GGAGACGGCG 
TCGGTACCGC CGGCGTTTCT CTCGAACACG GAGCGGGTGC TGGCGTTGCT TCGGGACAAC 
GACGGGCAGA TGCGACAGTC CGCGATCGTC GACGCGACGG ACTGGTCGAA ATCGAAGGTG 
AGCCGCGTCC TCTCGGAGAT GGACGAGGAG GGCCAGGTCG TGAAGGTGGA CATCGGGCGG 
AGCAACCTCA TCGTCCATCC CGAGAACCTG CCGGACGGTG CCAAACCACC GTTCGAGGAG 
TGA 

 

Protein sequence

MRDLAETAVV VCLLLSSVAF TGVHAAPAGV TVEDFAYSGP GSVPLEDGLF LWQSSSHEFT 
VTVSTTVTVE ADVCLVASLS GVADRRNLTC KAVSLRRGVT ERTSLSVSSW PVDVHGVQSV 
GVVFSTENGS TISSTSSVTV TVLQANASLD NDSLTDEREV ALGTDPTVAD TDGDGLDDGR 
EVEIHDTAPT NPDTDGDGLV DGSEVTVYGT DPTDPDTDDD GLADVDELLA DTSPTTPDTD 
GDGLTDGMEL DTYGTDPTVA DTDGDGLDDD LECAEYLTDP TNSDSDDDGL GDALEIRTYD 
TDPRGADTDG DGLDDGVEVG AYGTDPTVAD TDGDGLDDGA EINRFGTDPT VADTDDDGLD 
DGAEVTRFNT DPTSADTEGD GLDDGAEVNR FGTDPTSADT DGDGEGDAAE VSTGIFGLSW 
VPVEGLLVVG LTLAGGILVL SARSSFAIPF DHRRTDTSPE DDSPDHTKQG LDPGGSHASD 
RDVDASSERD LDASADPLEE APGGADPSKD ETEAGDGLAE TDTDDESAPA MEGREDATRG 
DSTTGADSAG PVEEHAEETA SVPPAFLSNT ERVLALLRDN DGQMRQSAIV DATDWSKSKV 
SRVLSEMDEE GQVVKVDIGR SNLIVHPENL PDGAKPPFEE