Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1658 |
Symbol | |
ID | 8383938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1640354 |
End bp | 1641217 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644972719 |
Product | UspA domain protein |
Protein accession | YP_003130564 |
Protein GI | 257052731 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGACC AGATCCTCCT CCCGGTCGAC GAAGGGACAG GGAACGCCGA GGTACTCCAC CACGCGGGCG AGATCGCCCA CCGCTTCGAC GCCGAGATCC GGCTGTTGCA CGTCGCCGAC ACTGACGAAT ATAGCGTGAC GCTCACCGAC GAGGGGGTCG TCGACGGCCT CGTCCGCCGT GGCGAGGAAC TCGTCGCCGA CCTGGGCGAG ACCTTCGAGA CCCTCGGCGT CGAGTACAGT ACCGACGTCG TTCAGGGAAC GCCGGCCGCG ACGATCGTCG AGTACGCGAG CGAATACGAC TACGACCTGC TCGTGATGCC GACCCACGCC CGCGAGGGGC TGTCGCACTT CCTGCTCGGC AGCGTCACCG AGAAAGTGGT GCGACTCTCA GACGTCCCGG TGCTCACCGC CCGGATGACC GAGGAGGACA CGTTCGCGTT CCCCTACGAG CGCATCCTGC TCCCGACCGA CAGCAGCGAG GCGTCGCGTC GCGCCGCCGA GCACGGCCTC GACCTCGCGG CGGCCATGGA CGCGACGGTC GACGTGCTCT CGGTGGTCGA GACCGCCGCA CTCGGGCCGG ACGTGCGTTC GAACGTCACC AGCGGCGACT TCGACCAGGG TGCCCACGAG GCGGTCTCGG ACGTGGCCGC CATGGCCGAA AAGCGGGGCG TCGAGGCGAG CACACACGTC GAGACCGGGT CGCCCGACGA GGAGATCCTC TCGGCCGTCG ACGAGTACGA CTGCCAGGCC GTCGTGATGG GCACGACCGG CCGCCGCGGC GTCGATCGGA TCCTGCTGGG CAGCGTCGCC GAGAAGACCG TCCGGTCCGC GCCGGTGCCG GTCGTGACCG TGCGTGAGGA GTGA
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Protein sequence | MYDQILLPVD EGTGNAEVLH HAGEIAHRFD AEIRLLHVAD TDEYSVTLTD EGVVDGLVRR GEELVADLGE TFETLGVEYS TDVVQGTPAA TIVEYASEYD YDLLVMPTHA REGLSHFLLG SVTEKVVRLS DVPVLTARMT EEDTFAFPYE RILLPTDSSE ASRRAAEHGL DLAAAMDATV DVLSVVETAA LGPDVRSNVT SGDFDQGAHE AVSDVAAMAE KRGVEASTHV ETGSPDEEIL SAVDEYDCQA VVMGTTGRRG VDRILLGSVA EKTVRSAPVP VVTVREE
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