| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1629 |
|---|
| Symbol | |
|---|
| ID | 8383908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1609372 |
|---|
| End bp | 1610307 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644972690 |
|---|
| Product | replication factor A |
|---|
| Protein accession | YP_003130536 |
|---|
| Protein GI | 257052703 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATT TGCATACCCA CGCGGAAGAG ATACACGAGC AGTTCGCAGA CCAGCTAGAC
GTGAGTGTCG ACGATGTCAC GGAACGACTC GACACGCTGG TCAACGAGTA CCAGGTACCG
ATCAGCGAGG CGCGCCGGAG CGTCACCAAC TCCTACCTCG ACGAGGCAGG GCTAGATCGC
GAGGACATCG GCGGCGGAAG CGGCGGTAAC GAGACCGTCC AGGCTGCCGA TGTCGACGCG
CCCGAGGAGT GGGTCGACAT GACGGCAAAG GTCGTCGAGC TCTGGGAGCC CCGGAGCGAC
GCCGTCGCCC AGGTCGGCCT GCTGGGCGAC GAGACCGGGA CGATCAAGTT CACCAAGTGG
TCCAAATCCG ACCTCCCGGA ACTCGCGGAG GGGGCGACCT ACCACCTCCG GAACGTCGTC
ACCGACGAGT ACCAGGGCCG GTTCTCGGTC AAACTCAACC GGACGACCGT CATCGAGGAG
ACCGACGAGG AGATCGAGGT CGGCGACGAC GCCCTCGAAG TCGAGGGGGC CCTGGTCGAC
ATCCAGAGCG GCAGCGGCCT GATCAAGCGG TGTCCGGAGG ACGATTGCAC GCGCGTCCTC
CAGAACGGGC GGTGTTCCGA GCACGGCGAG GTCGAGGGCG AGTTCGACCT CCGGATCAAG
GGCGTCCTCG ACGACGGCGA GGAGGTCACC GAGGTCATTT TCGATCAGGA AGCCACCGAG
AACCTCACCG GTGTGACGCT CGAAGAGGCC AAGGACATGG CGATGGACGC CCTCGATACG
AGCGTCGTCG TCGAGGAGAT GCAGGGGACG ATCATGGGGC GGTACTACCG CGTCGAGGGT
CCGACCTTCG GGCGGTACCT GCTGGCCGAC GAGATCGAGA CGCTGACTGA CGCGGTCGAT
CCTGAAGCCA CGCTGATCAA AGCGAGGTCG ATATAA
|
|---|
| Protein sequence | MTDLHTHAEE IHEQFADQLD VSVDDVTERL DTLVNEYQVP ISEARRSVTN SYLDEAGLDR
EDIGGGSGGN ETVQAADVDA PEEWVDMTAK VVELWEPRSD AVAQVGLLGD ETGTIKFTKW
SKSDLPELAE GATYHLRNVV TDEYQGRFSV KLNRTTVIEE TDEEIEVGDD ALEVEGALVD
IQSGSGLIKR CPEDDCTRVL QNGRCSEHGE VEGEFDLRIK GVLDDGEEVT EVIFDQEATE
NLTGVTLEEA KDMAMDALDT SVVVEEMQGT IMGRYYRVEG PTFGRYLLAD EIETLTDAVD
PEATLIKARS I
|
|---|
| |