| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1538 |
|---|
| Symbol | |
|---|
| ID | 8383817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1513526 |
|---|
| End bp | 1513984 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644972600 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003130446 |
|---|
| Protein GI | 257052613 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.819004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTACG AAAATCTCGA CCGCAAGCTG ATCAATGCGC TACTAGACGA CGGCCGTGCG
AGTCTCCGAA GCCTCGCCGA CGACCTCGAC GTCTCGGTGA CGACCGTCTC GAATCACCTC
TCGACGCTCG AAGAGGAGGG GATCATCGAG GGCTATACGC CGAAGGTCGA CTACGACAAG
ATCGGCTACG ACGTCACAGC GATCTTACAG CTCAAGGTCG AAGGGAGTGC GCTCCCGGAG
GTCACTGAAA GTCTCAGGGA ACACGAACAG ATGGTCAGCG TTTACGAGGT CACCGGCGAT
TACGACATCA TCGCCGTCGG GAAGTTCGCC GACACCGACG ACATGAACGC CCAGATCAAG
AGCCTGCTCA CCGATCCGGC GATCCTCGAA TCCAACACCA GCGTCGTGTT GAATGCCGCC
GTCGAACACG AACAGTTCGA ACTAGAAGTC GAAGAGTGA
|
|---|
| Protein sequence | MTYENLDRKL INALLDDGRA SLRSLADDLD VSVTTVSNHL STLEEEGIIE GYTPKVDYDK
IGYDVTAILQ LKVEGSALPE VTESLREHEQ MVSVYEVTGD YDIIAVGKFA DTDDMNAQIK
SLLTDPAILE SNTSVVLNAA VEHEQFELEV EE
|
|---|
| |