Gene Huta_1464 details

Gene Information

• Locus tag: Huta_1464
• ID: 8383743
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1434573
• End bp: 1436564
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644972527
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_003130373
• Protein GI: 257052540
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACTA CGCGGCGAAT CCTGACACTC GCCGTTGGAC TCGGAATGTC CGTCTGGGTT 
CTCGATGCGG CACTGGACAC CCTGTTCTTC TACGAGGAGA CACCGTTCGT CGCGCTGCTC 
GTGACAGACA TCCCGGCCCA CGAACTGTAC ATTCGACTGG TGATCATGGC CGTCTTCGTG 
GCCGCGGGAG CCGTCGCGGC GAGACAGGCC ACACAGATGC GAGAACACGA GCGGGACGTG 
ACGCTGTTTC GTCAACTGGT CGATGACGCC TCCGACAGCG TGTTCGTCAT CGATCCCGAG 
ACCGGTCGCA TCACGGACGT CAACGAGACC GCCTGTGAGG TGCTGGGGTA CGATCGGTCG 
ACGCTGTTGG AGATGACACC CGCCGACCTC AACACCGAGT TCGATGATGC GACGGCATTC 
CGCGAGTTTC TCACGGCACC CGAACACGAG ACCCTGGAGT ACTACGAGAC GGTCCACGAG 
CGGGCCGACG GGACGACGTT CCCGGTCGAG ATATCGGCCT CGATGGTGAC GATCGACGAC 
CAGCAGTTTC GAATCGCGAT CGCCAGGGAC ATCTCCAGCC GGAGAGAACG CGAACGCCGG 
ATTACCCACT ACAAACAGGC CGTCGAGAGT TCGCGAGACC TGCTGACTGC AGTCGATTCG 
GAGTTGCAGT TCCTGTTTGC CAACGAGGCG TTTCGGCGAT TTCACGGCAT CGGGGCGGAG 
ACGGTTCAGG GAGAACCACT CGAAAGCGTT CTCGACGACC AGGAGTTTGA GATAGTCGAG 
CCCCGCCTCC GGGACGCGCT GGCGGGCGAT CGAGTCTCCT TCGAAATGGT TCGGACCCAT 
GCTTCGGAGG GCGAGCGTGT ACTCGACATC CGCTACTGGC CACTTCGGGA CACCGACGGG 
GCGATCCAAG GGGTGGGAGC GTCACTGCGG GACGTCACAG AGCAAAAGGA GATGGTCGAG 
GACCTCCGGC GGGCCCGACA GCGCTACGAG TCGCTGTTCG ACAGCATCAG AGACGCCATT 
CTGGTCGCCG ATACCGACCG CCGGATCGTC GACTGCAACC CGGCGTTTAC GGAGCTGTTC 
GGCTACGACT TGGCGGAAAT CGAGGGCAAG CCGACGGGGT ACGTCTACGA GAATGCCGAC 
GAATTCGAGG CGATGGGCGA ATCCCTGGGT CAGCACATGG ACGATCCGAC CTTCGTGCAG 
ACAGTCCACT ACGAGAAGAA GTCCGGACAG GTGTTTCCCG GCGAGACGAA CGTCTTCTAC 
CTCCGGGATC GGGACGGTGA GATAACCGGA TTCATCGGAC TCATCAGAGA CGTCTCGGAT 
CGGCGCGCCC GGATTACCCA GATCCGGACG ATCGACCGCG TTCTCCGGCA CAACCTCAAC 
AACGCCCTGA CGGTCATCCT GGGCAATGCC GACTCGATCG TCGACGCCAC AACGGGCGAT 
CCCCGACGGA GTGCCGAACG GATCATCCGG ACGGGAGAAC AGCTCCGGGC CACGGCAGAA 
AAAGAGCGAA AGATCACGAG TTTCCTGGCA GAGTCCCGAC CCACCACCGG GCGTGACGCG 
TCCGCAATCA TCGAGAGCGT TGTCGCCGAC CTGCGCGAAC AGTACCCCGA GGCCGATCTG 
ACAGTCGATC TGCCGGCCGA ACAGCCCGTT CTCTCGGTGG ACCAGCTCGA CCGGGCGATC 
AAAGAGCTCG TCGAGAACGC CGTCACCCAC TCGGATCGAA GCAGTCCATC GGTCACGGTG 
TCGGTGGACA CCAACGGCGA CATCGTCGAG ATCAGCGTCG CCGACGACGG ACCCGGGATC 
CCCGAGATGG AGCGCCAGGT GTTGATCGGC AACCAGGAGA TCGAACCGCT GTTTCACGGA 
CAGGGGATCG GGCTGTGGCT GGTCCATCTG ATCGTCCAGT ATTCCGACGG CCAGCTTTCG 
GTCACCCAGA ACGACCCCCG CGGGAGCATC GTCACCGTTC GGCTGCACTC TCCTGGCGAG 
AAGGGGCAGT AG 

 

Protein sequence

MQTTRRILTL AVGLGMSVWV LDAALDTLFF YEETPFVALL VTDIPAHELY IRLVIMAVFV 
AAGAVAARQA TQMREHERDV TLFRQLVDDA SDSVFVIDPE TGRITDVNET ACEVLGYDRS 
TLLEMTPADL NTEFDDATAF REFLTAPEHE TLEYYETVHE RADGTTFPVE ISASMVTIDD 
QQFRIAIARD ISSRRERERR ITHYKQAVES SRDLLTAVDS ELQFLFANEA FRRFHGIGAE 
TVQGEPLESV LDDQEFEIVE PRLRDALAGD RVSFEMVRTH ASEGERVLDI RYWPLRDTDG 
AIQGVGASLR DVTEQKEMVE DLRRARQRYE SLFDSIRDAI LVADTDRRIV DCNPAFTELF 
GYDLAEIEGK PTGYVYENAD EFEAMGESLG QHMDDPTFVQ TVHYEKKSGQ VFPGETNVFY 
LRDRDGEITG FIGLIRDVSD RRARITQIRT IDRVLRHNLN NALTVILGNA DSIVDATTGD 
PRRSAERIIR TGEQLRATAE KERKITSFLA ESRPTTGRDA SAIIESVVAD LREQYPEADL 
TVDLPAEQPV LSVDQLDRAI KELVENAVTH SDRSSPSVTV SVDTNGDIVE ISVADDGPGI 
PEMERQVLIG NQEIEPLFHG QGIGLWLVHL IVQYSDGQLS VTQNDPRGSI VTVRLHSPGE 
KGQ