Gene Huta_1420 details

Gene Information

• Locus tag: Huta_1420
• ID: 8383699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1389012
• End bp: 1389728
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644972483
• Product: ABC transporter related
• Protein accession: YP_003130329
• Protein GI: 257052496
• COG category: [V] Defense mechanisms
• COG ID: [COG1131] ABC-type multidrug transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAC CAGCGGTGAC GGTCTCCGCC TTGGAGAAAC GATACGGCGA CGTACAGGCC 
CTCCGCGGCG TCTCCTTTAC CGTCGAGCCC GGCGAGATCT ACGGGCTCGT CGGGCCGAAC 
GGCGCGGGCA AAACCACGAC CCTCCGGACG CTCTCGACGC TGTTGACTGT CGGCGACGGC 
GACGTGACCG TCTTCGGTGC CGACGTCGAG GCCGAACCCA ACGAGGTCCG CAAGCGCATC 
CGGTATCTCC CCGAGGACGC CGGGTCCTAC GACAACCTCT CCGGCCGACA GTACCTGGAA 
TTTGTGGCGG ACTTCTACGA CGGCGATCCC GACGCGACCG TCGAGCGGGG CGTCGAAATC 
GCCGATCTGG CCGACCGGAT CGAGAGCAAG ACCAGCGAGT ACTCCAAGGG GATGACCCGC 
AAGCTCTTGC TGGCGAGTAC AATCATGACC GAACCCGACC TGGCGATCTT GGACGAGCCA 
ACCTCGGGGC TGGACGTCGA AAACGCCCGG GCGATCCGGG ACATCATCAA GGATTTCCCC 
GGCGCGAACC GGAGCGTCCT GCTTTCGAGT CACAACATGC TCGAAGTCCA GTATCTGTGT 
GACCGGATCG GGCTGCTCAA CGAGGGCGAG ATCGTGGCCG AAGGCCCGCC AGAGGAGATC 
ATCGAGCGCT ACGACGCCGA AAACTTGGAG GAGGCCTTCC TGGAGGCGGT CGCATGA 

 

Protein sequence

MAEPAVTVSA LEKRYGDVQA LRGVSFTVEP GEIYGLVGPN GAGKTTTLRT LSTLLTVGDG 
DVTVFGADVE AEPNEVRKRI RYLPEDAGSY DNLSGRQYLE FVADFYDGDP DATVERGVEI 
ADLADRIESK TSEYSKGMTR KLLLASTIMT EPDLAILDEP TSGLDVENAR AIRDIIKDFP 
GANRSVLLSS HNMLEVQYLC DRIGLLNEGE IVAEGPPEEI IERYDAENLE EAFLEAVA