Gene Huta_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1378 
Symbol 
ID8383657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1352581 
End bp1353363 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID644972441 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003130287 
Protein GI257052454 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTACA ACGTCCGCTA CGACAACCCC GAGGACGGCG AGCACCGCTG GGCGAACCGT 
CGCGAGGCTG TTTCGAGCAC GATCCGGTTT CACGCGCCCG ATGTCGTCGG CCTTCAGGAA
CCACTCGATC ACCAACTCGC AGACGTCGCC GATCGCCTCC CCAGTTTCGA GTGGATCGGT
AGTGGCCGCG TCGACGGCGA ATCGGAAGGT GAACACACCC CGATCGGCTA CCGGACCGAC
CGGATCGAAT ACGTCGATGG CGACACCTTC TGGCTCTCGG AGGCCCCTGA GGAGCCTGGA
TCTGTCGGCT GGGACGCCCG CTATCCCCGA ATCGTGACCT GGGCGCGCCT GCGTGACCGC
CGGACCGACG CCACCCTGCT GTTCGCGAAC ACGCACTTCT CGCACGACGG CCCGCGGGCC
CGCCGGAAGA GCGCCCATCT CTTGCTCGAC CGACTCGCTG ACCTGCGGGA TGACGAGCCC
GTGGTTCTCA CGGGCGATTT CAACTGCGTG GCGGGCGAAG AGCCCTACGA GATTCTGACC
GGCGAGGACA GCCCGCTCGC CCTCAGTGGC GAACAAGAAC GATCGGCCGA ACCCGCTCAC
GGCCCGCCGA CATCCGTGAC GGACTTCGAG AATCTGGTGC CGAATCGCAA GATCGACCAC
GTCTTCACGA CGCCCGACGT GACTGTCGGC ACTCACGGCG TCTGCAGCGA CGTCTACGAC
GACGGCCGGT TCCCCTCCGA TCATCTGCCG GTGCTGGTCG AACTCGGTCC GGGTGAGGGG
TAG
 
Protein sequence
MTYNVRYDNP EDGEHRWANR REAVSSTIRF HAPDVVGLQE PLDHQLADVA DRLPSFEWIG 
SGRVDGESEG EHTPIGYRTD RIEYVDGDTF WLSEAPEEPG SVGWDARYPR IVTWARLRDR
RTDATLLFAN THFSHDGPRA RRKSAHLLLD RLADLRDDEP VVLTGDFNCV AGEEPYEILT
GEDSPLALSG EQERSAEPAH GPPTSVTDFE NLVPNRKIDH VFTTPDVTVG THGVCSDVYD
DGRFPSDHLP VLVELGPGEG