Gene Huta_1375 details

Gene Information

• Locus tag: Huta_1375
• ID: 8383654
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1349351
• End bp: 1351306
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644972438
• Product: ABC transporter related
• Protein accession: YP_003130284
• Protein GI: 257052451
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.250681
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTGGG GCTTTTCGGG CGGCAACGAC GACGCGGACA CCTTCGAACA CCTCCGTGAG 
GGTGTCGACC GCCCGATGTG GCGGCTCCTC GGGAACTACG GCCGGGGATA CATTCCGGAG 
TTCGTCCTCG GTGGGGTGGC GAGCGTCGTC GCACGGTTTC TCGAACTCAT TCCGGCGCTG 
GTGCTCGGGG TCGCCATCGA CGCGCTGTTC GTCGGGGGCC AGGATTTCAC GCTGCCGCTC 
GTCCCGCAGT CGGTCATCCC GGCGGACGAG CCGGGGCAGT TCTGGTTCGC CGTCGGCCTG 
GTCGGGGCGG TTTATCTGCT CAGCGCCGGG CTGAACTGGG TCAACGGCTG GGCCTGGAAC 
CGCTTCGCCC AGCACCTCCA ACACGAGGTC CGGGTCGACA CCTACGACGT CGTCCAGCGG 
ATGCGCATGG GCTTTTTCGA CGACAAACAG ACCGGCGAGG TCATGTCGAT CCTCAACAAC 
GACGTCAACC AGCTCGAGAG TTTTCTCACG AACGATCTCA ACGCCGGCAT CCGGATCTCC 
GTGCTCGTGG TCGGCGTCGC GAGCGTGATG GTCTGGCTCA ACTGGCAACT CGCCATCGTC 
GCGCTGCTGT CGGTGCCGGT GCTCGCCGTC GCGAGTTACC TCTTCGTCCA GCGGATCGGC 
CCCAAGTACG GCCGCGTCCG GCGGTCGGTC GGGGCGCTCA ACTCCCGGCT CGAGAACAAC 
ATCGGCGGCA TCGAGGTCGT GAAGTCCTAC GGCCGGGAGT CCTTCGAGCG CGACCGTGTC 
GAGGAGGCCT CCGAGGAGTA CCTCGACGCC AACTGGGACG CAATTACGAC CCGAATCAAG 
TTTTTCCCGA CACTACGGAT CATCACCGGG CTGGGATACA TGTTCACGTT CCTCGTCGGC 
GGGTACTGGC TGCTGTTCGG GCCGCCATCC GTGTCACTCG CCGGGACGAC CGTCGGGTTC 
ACGGGCGGGA TGACACTTGG CGTACTCACA CCGATGTTGC TGTACGCCAG GCGGTTCCTC 
TGGCCGATGC GCCAGTTCGG CAACGTCGTC AACAACTACC GCTACGCCTT CGCGGCCGCG 
GAACGGATCG TCGGCCTCAT GGAGTACCCG GGCACCGTCG ACGATCCCGA CGACGCGGTC 
GACCTGGGCG GCGTCGACGG TCGCGTCTCC TACGCGGACG TGACGTTCCA GTACCCGGAA 
GCCGACGAGG CCTCGGTCGA CGACGTGAGT TTCAGCGCCG AGGCCGGCGA CTTCGTGGGC 
CTCGTCGGCC CGACCGGCGC GGGCAAGACC ACCCTGCTCA AACTCCTGGT GCGGCTCTAC 
GATCCCGAGG AGGGCGAGAT CCGCGTCGAC GGCCACGACG TCAGGGACGT CTCCCTCGCG 
AGCCTCCGCG AGCACGTCGG CTACGTCAGC CAGGAGCCGT ATCTCTTCCA CGGGACCGTC 
GCCGAGAACG TCGCCTACGG CATCGACGCC GGCGACGACG AAATCCGCGA GGCGCTCTCG 
ATGGCCGGCG CGATGGAGTT CGTCACCGAA TTACCGGAGG AAATCGACAC GATGGTCGGC 
GAACGCGGCG TGAAACTCTC GGGCGGGCAG CGCCAGCGTG TCGCCATCGC GAGAGCGATC 
CTCGAAGATC CGGAGATCCT GATTCTCGAC GAGGCGACCT CCCACGTCGA CAACGAGACC 
GAGGTCCTGA TCCAGCGCTC CCTGGAGACG CTGACGGCCG ACCGAACGAC CTTCGCCATC 
GCTCACCGCC TCTCGACGGT CCGGGACGCC GACACCATCC TCGTGATGGA CGAGGGGCGG 
GTCGTCGAGC GCGGGACACA CGAGGACCTC CTCGCCGCCG ATGGGCTCTA TGCCAACCTC 
TGGAGTGTCC AGGTCGGCGA GATGGAGGCC CTCCCCGAGG AGTTCATCGA GCGCACGGCC 
GAGCGCGAAC GGGCGGGGAC CGGCGATGAC GACTGA 

 

Protein sequence

MSWGFSGGND DADTFEHLRE GVDRPMWRLL GNYGRGYIPE FVLGGVASVV ARFLELIPAL 
VLGVAIDALF VGGQDFTLPL VPQSVIPADE PGQFWFAVGL VGAVYLLSAG LNWVNGWAWN 
RFAQHLQHEV RVDTYDVVQR MRMGFFDDKQ TGEVMSILNN DVNQLESFLT NDLNAGIRIS 
VLVVGVASVM VWLNWQLAIV ALLSVPVLAV ASYLFVQRIG PKYGRVRRSV GALNSRLENN 
IGGIEVVKSY GRESFERDRV EEASEEYLDA NWDAITTRIK FFPTLRIITG LGYMFTFLVG 
GYWLLFGPPS VSLAGTTVGF TGGMTLGVLT PMLLYARRFL WPMRQFGNVV NNYRYAFAAA 
ERIVGLMEYP GTVDDPDDAV DLGGVDGRVS YADVTFQYPE ADEASVDDVS FSAEAGDFVG 
LVGPTGAGKT TLLKLLVRLY DPEEGEIRVD GHDVRDVSLA SLREHVGYVS QEPYLFHGTV 
AENVAYGIDA GDDEIREALS MAGAMEFVTE LPEEIDTMVG ERGVKLSGGQ RQRVAIARAI 
LEDPEILILD EATSHVDNET EVLIQRSLET LTADRTTFAI AHRLSTVRDA DTILVMDEGR 
VVERGTHEDL LAADGLYANL WSVQVGEMEA LPEEFIERTA ERERAGTGDD D