Gene Huta_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1342 
Symbol 
ID8383619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1311448 
End bp1312287 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID644972403 
ProductABC-2 type transporter 
Protein accessionYP_003130251 
Protein GI257052418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.333729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAA CTGAGACGGC CAACACGAGA TTGAGAGACC TGCGAGTCAA CGCCGAGCGC 
TGGACTCGCA AAGCGGTCCA CAATCCGACG GCGTTTCTCG TCGAGATCGC CGTCGCAACC
CTTTCGCTTG TCCTCTTCAG CGCGGTCTTT GGCGACGTGG GCGGATTGGC GCTCGAACGC
GCCGGGTTTG GCGACGTGGC GTACGTCACC TACCTGCTGC CGGCCGTCCT CATGCAGGCG
ACGATGGGGT CTGCCTTTTC GTCGGGAATG GGGCTCGTGC GCGACCTCGA GACGGGTATG
TTCGAGAAGA CGATCGTCAC GCCGATGTCC GCGACGGCCG TCTTCGCCGG GAAGGCCGCC
GCGGAGTTGG CCCAGATCGT CGTCCAGCTG TCCGTCGTCG TCGGCCTCGC GGTTGCGATC
GGTGCGAACA TCGAAACCGG TGCGATCGGT GTCCTCGGCA TTCTCGCCAT CTGTCTGCTT
GTCGGCCTGC TCTTTATGGC CGTCTCGAAC ATCGTCGGGT TGCTCGCGCG CGACGAAGAG
GTCATCAACG CGGCGACGAT GCTGTTCATG TTCCCGTTGC TCTTTCTCTC ACCGGCGTTC
ATCCCGCTGT CCGATGATAT CGAATTGGTT GCCACCTTCA ACCCGATCAC CTACGGCGTC
GAGGCGGTCC GCGCGCTGGT CCTCGGCGAG GACACACTGA CGGTGGTGTC GGTGTCGTGG
TTCGGCGGTG TTGCCGACAC CGTCGTCCCC GCTGTCGGTA TCCTTCTCGT CCTCAACGGC
ATCGTCGGGG CCATCGCCAT CCGACTGCTG GCCCGTGCCA GCAGCGCTTC CGTGGCTTGA
 
Protein sequence
MSVTETANTR LRDLRVNAER WTRKAVHNPT AFLVEIAVAT LSLVLFSAVF GDVGGLALER 
AGFGDVAYVT YLLPAVLMQA TMGSAFSSGM GLVRDLETGM FEKTIVTPMS ATAVFAGKAA
AELAQIVVQL SVVVGLAVAI GANIETGAIG VLGILAICLL VGLLFMAVSN IVGLLARDEE
VINAATMLFM FPLLFLSPAF IPLSDDIELV ATFNPITYGV EAVRALVLGE DTLTVVSVSW
FGGVADTVVP AVGILLVLNG IVGAIAIRLL ARASSASVA